Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Igkv13-82-201ENSMUST00000200308 346 ntBASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Igkv1-136-201ENSMUST00000200635 297 ntBASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Gm34701-202ENSMUST00000204685 360 ntBASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Gm45013-201ENSMUST00000206883 178 ntBASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Gm45912-201ENSMUST00000210646 543 ntBASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Gm20304-201ENSMUST00000218168 444 ntBASIC1.92□□□□□ -2.1
Lima1Q9ERG0 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC1.92□□□□□ -2.1
Lima1Q9ERG0 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Gm3333-202ENSMUST00000221763 1044 ntBASIC1.92□□□□□ -2.1
Lima1Q9ERG0 AC161758.1-201ENSMUST00000226123 310 ntBASIC1.92□□□□□ -2.1
Lima1Q9ERG0 AC121114.1-201ENSMUST00000228522 570 ntBASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Gm26203-201ENSMUST00000082911 114 ntBASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Mir93-201ENSMUST00000083593 88 ntBASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Gm13331-201ENSMUST00000117500 448 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm15067-201ENSMUST00000119534 156 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm11471-201ENSMUST00000121824 198 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm25621-201ENSMUST00000157223 114 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm26348-201ENSMUST00000157528 240 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm22727-201ENSMUST00000158090 116 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm20794-201ENSMUST00000177626 628 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm28356-202ENSMUST00000187566 858 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm20885-201ENSMUST00000190192 654 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm38281-201ENSMUST00000192301 315 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm33571-201ENSMUST00000193271 657 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm36866-201ENSMUST00000193343 657 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm36047-201ENSMUST00000193659 657 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm20857-201ENSMUST00000194766 657 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm20858-201ENSMUST00000195459 657 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm30638-201ENSMUST00000195570 656 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Gm42665-201ENSMUST00000202100 586 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Lima1Q9ERG0 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 AC122924.2-201ENSMUST00000220799 298 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 CT030684.2-201ENSMUST00000228946 826 ntBASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Lima1Q9ERG0 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Gm24907-201ENSMUST00000116932 128 ntBASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Gm12941-201ENSMUST00000117934 220 ntBASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Gm14898-201ENSMUST00000120202 645 ntBASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Gm13555-201ENSMUST00000121668 319 ntBASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Gm26345-201ENSMUST00000157534 120 ntBASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Gm17164-201ENSMUST00000169013 506 ntBASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Gm20058-201ENSMUST00000186939 284 ntBASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Gm37987-201ENSMUST00000194999 825 ntBASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Gm43286-201ENSMUST00000197420 424 ntBASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Gm43865-201ENSMUST00000204721 127 ntBASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Gm45252-201ENSMUST00000211579 397 ntBASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Gm18252-203ENSMUST00000215855 757 ntBASIC1.9□□□□□ -2.11
Lima1Q9ERG0 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Lima1Q9ERG0 CT030238.4-201ENSMUST00000228579 801 ntBASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.9□□□□□ -2.11
Lima1Q9ERG0 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Lima1Q9ERG0 Gm26342-201ENSMUST00000104557 129 ntBASIC1.89□□□□□ -2.11
Lima1Q9ERG0 Gm15281-201ENSMUST00000125181 351 ntBASIC1.89□□□□□ -2.11
Lima1Q9ERG0 Gm24780-201ENSMUST00000157635 143 ntBASIC1.89□□□□□ -2.11
Lima1Q9ERG0 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Lima1Q9ERG0 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Lima1Q9ERG0 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Lima1Q9ERG0 Gm23963-201ENSMUST00000179603 77 ntBASIC1.89□□□□□ -2.11
Lima1Q9ERG0 Mir6995-201ENSMUST00000183658 71 ntBASIC1.89□□□□□ -2.11
Lima1Q9ERG0 Gm27443-201ENSMUST00000184660 98 ntBASIC1.89□□□□□ -2.11
Lima1Q9ERG0 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC1.89□□□□□ -2.11
Lima1Q9ERG0 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC1.89□□□□□ -2.11
Lima1Q9ERG0 AL929285.1-201ENSMUST00000215522 229 ntBASIC1.89□□□□□ -2.11
Lima1Q9ERG0 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.89□□□□□ -2.11
Lima1Q9ERG0 Gm23727-201ENSMUST00000083352 164 ntBASIC1.89□□□□□ -2.11
Lima1Q9ERG0 Gm23650-201ENSMUST00000083355 70 ntBASIC1.89□□□□□ -2.11
Lima1Q9ERG0 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.89□□□□□ -2.11
Lima1Q9ERG0 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Lima1Q9ERG0 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm14945-201ENSMUST00000119556 1118 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm11438-201ENSMUST00000121582 189 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm16328-201ENSMUST00000126985 196 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms