Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.73□□□□□ -1.97
Scn4aQ9ER60 Snord14c-201ENSMUST00000101927 86 ntBASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Gm2966-201ENSMUST00000166052 481 ntBASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Mir7059-201ENSMUST00000184825 59 ntBASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Gm44458-201ENSMUST00000196594 143 ntBASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Gm2446-201ENSMUST00000220144 772 ntBASIC2.72□□□□□ -1.97
Scn4aQ9ER60 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.72□□□□□ -1.97
Scn4aQ9ER60 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Gm26377-201ENSMUST00000102184 108 ntBASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Gm23223-201ENSMUST00000158119 127 ntBASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Gm7909-201ENSMUST00000182688 614 ntBASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Gm27599-201ENSMUST00000183758 174 ntBASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Gm7329-201ENSMUST00000185915 210 ntBASIC2.72□□□□□ -1.97
Scn4aQ9ER60 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Gm35931-201ENSMUST00000203931 448 ntBASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.72□□□□□ -1.97
Scn4aQ9ER60 AC153646.1-201ENSMUST00000223229 1279 ntBASIC2.72□□□□□ -1.97
Scn4aQ9ER60 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Gm6030-201ENSMUST00000078768 402 ntBASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Scn4aQ9ER60 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
Scn4aQ9ER60 Gm9009-201ENSMUST00000117321 326 ntBASIC2.71□□□□□ -1.98
Scn4aQ9ER60 Gm2020-201ENSMUST00000145242 579 ntBASIC2.71□□□□□ -1.98
Scn4aQ9ER60 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.71□□□□□ -1.98
Scn4aQ9ER60 Gm29754-201ENSMUST00000206269 358 ntBASIC2.71□□□□□ -1.98
Scn4aQ9ER60 Gm46193-201ENSMUST00000219399 364 ntBASIC2.71□□□□□ -1.98
Scn4aQ9ER60 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.71□□□□□ -1.98
Scn4aQ9ER60 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Scn4aQ9ER60 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.71□□□□□ -1.98
Scn4aQ9ER60 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Scn4aQ9ER60 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Scn4aQ9ER60 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Scn4aQ9ER60 Mir6372-201ENSMUST00000185114 109 ntBASIC2.7□□□□□ -1.98
Scn4aQ9ER60 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.7□□□□□ -1.98
Scn4aQ9ER60 Gm7751-201ENSMUST00000212868 709 ntBASIC2.7□□□□□ -1.98
Scn4aQ9ER60 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.7□□□□□ -1.98
Scn4aQ9ER60 Gm24610-201ENSMUST00000083270 109 ntBASIC2.7□□□□□ -1.98
Scn4aQ9ER60 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Scn4aQ9ER60 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Scn4aQ9ER60 Gm14652-201ENSMUST00000118479 235 ntBASIC2.7□□□□□ -1.98
Scn4aQ9ER60 Gm11356-201ENSMUST00000118974 192 ntBASIC2.7□□□□□ -1.98
Scn4aQ9ER60 Gm25109-201ENSMUST00000122474 114 ntBASIC2.7□□□□□ -1.98
Scn4aQ9ER60 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.7□□□□□ -1.98
Scn4aQ9ER60 Gm43224-201ENSMUST00000201567 898 ntBASIC2.7□□□□□ -1.98
Scn4aQ9ER60 Gm43004-201ENSMUST00000201872 703 ntBASIC2.7□□□□□ -1.98
Scn4aQ9ER60 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC2.7□□□□□ -1.98
Scn4aQ9ER60 Gm46136-201ENSMUST00000214730 565 ntBASIC2.7□□□□□ -1.98
Scn4aQ9ER60 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.7□□□□□ -1.98
Scn4aQ9ER60 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Scn4aQ9ER60 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Scn4aQ9ER60 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22003-201ENSMUST00000101885 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22817-201ENSMUST00000157448 356 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm17154-201ENSMUST00000165748 431 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm23053-201ENSMUST00000175136 96 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm24540-201ENSMUST00000177627 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm25256-201ENSMUST00000177746 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22822-201ENSMUST00000177941 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Rnu6-201ENSMUST00000178023 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm24753-201ENSMUST00000178183 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm25829-201ENSMUST00000178275 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22092-201ENSMUST00000178290 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm24486-201ENSMUST00000178420 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm23217-201ENSMUST00000178482 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm23092-201ENSMUST00000178688 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm23269-201ENSMUST00000178701 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm25709-201ENSMUST00000178844 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm25547-201ENSMUST00000178877 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm24722-201ENSMUST00000179017 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22969-201ENSMUST00000179018 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22129-201ENSMUST00000179034 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm24873-201ENSMUST00000179101 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm23934-201ENSMUST00000179111 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22623-201ENSMUST00000179244 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm25737-201ENSMUST00000179274 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22618-201ENSMUST00000179376 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm24182-201ENSMUST00000179419 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm24242-201ENSMUST00000179440 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm25064-201ENSMUST00000179535 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm26295-201ENSMUST00000179690 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22823-201ENSMUST00000179754 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22360-201ENSMUST00000179775 107 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms