Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm19540-201ENSMUST00000221843 810 ntBASIC1.43□□□□□ -2.18
Cpsf1Q9EPU4 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.43□□□□□ -2.18
Cpsf1Q9EPU4 Gm25099-201ENSMUST00000093716 116 ntBASIC1.43□□□□□ -2.18
Cpsf1Q9EPU4 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
Cpsf1Q9EPU4 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
Cpsf1Q9EPU4 Gm23991-201ENSMUST00000117033 93 ntBASIC1.42□□□□□ -2.18
Cpsf1Q9EPU4 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
Cpsf1Q9EPU4 Gm13602-201ENSMUST00000122405 493 ntBASIC1.42□□□□□ -2.18
Cpsf1Q9EPU4 Gm22862-201ENSMUST00000178593 121 ntBASIC1.42□□□□□ -2.18
Cpsf1Q9EPU4 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.42□□□□□ -2.18
Cpsf1Q9EPU4 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.42□□□□□ -2.18
Cpsf1Q9EPU4 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Cpsf1Q9EPU4 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Cpsf1Q9EPU4 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.42□□□□□ -2.18
Cpsf1Q9EPU4 Gm11248-201ENSMUST00000119568 201 ntBASIC1.41□□□□□ -2.18
Cpsf1Q9EPU4 Gm25368-201ENSMUST00000158847 131 ntBASIC1.41□□□□□ -2.18
Cpsf1Q9EPU4 Gm9071-201ENSMUST00000165915 474 ntBASIC1.41□□□□□ -2.18
Cpsf1Q9EPU4 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Cpsf1Q9EPU4 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC1.41□□□□□ -2.18
Cpsf1Q9EPU4 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Cpsf1Q9EPU4 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC1.41□□□□□ -2.18
Cpsf1Q9EPU4 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.4□□□□□ -2.18
Cpsf1Q9EPU4 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC1.4□□□□□ -2.18
Cpsf1Q9EPU4 Mir1904-201ENSMUST00000122702 80 ntBASIC1.4□□□□□ -2.18
Cpsf1Q9EPU4 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.4□□□□□ -2.18
Cpsf1Q9EPU4 Gm8125-201ENSMUST00000216602 738 ntBASIC1.4□□□□□ -2.18
Cpsf1Q9EPU4 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
Cpsf1Q9EPU4 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC1.4□□□□□ -2.18
Cpsf1Q9EPU4 Gm6109-201ENSMUST00000223297 348 ntBASIC1.4□□□□□ -2.18
Cpsf1Q9EPU4 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.4□□□□□ -2.18
Cpsf1Q9EPU4 Gm22740-201ENSMUST00000083439 109 ntBASIC1.4□□□□□ -2.18
Cpsf1Q9EPU4 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Cpsf1Q9EPU4 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.4□□□□□ -2.19
Cpsf1Q9EPU4 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.4□□□□□ -2.19
Cpsf1Q9EPU4 Gm23167-201ENSMUST00000157155 103 ntBASIC1.4□□□□□ -2.19
Cpsf1Q9EPU4 Gm28552-201ENSMUST00000190725 388 ntBASIC1.4□□□□□ -2.19
Cpsf1Q9EPU4 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.4□□□□□ -2.19
Cpsf1Q9EPU4 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC1.4□□□□□ -2.19
Cpsf1Q9EPU4 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Cpsf1Q9EPU4 Gm10794-201ENSMUST00000099624 207 ntBASIC1.4□□□□□ -2.19
Cpsf1Q9EPU4 Gm14899-201ENSMUST00000118673 548 ntBASIC1.39□□□□□ -2.19
Cpsf1Q9EPU4 Gm6829-201ENSMUST00000119858 360 ntBASIC1.39□□□□□ -2.19
Cpsf1Q9EPU4 Gm22315-201ENSMUST00000158010 143 ntBASIC1.39□□□□□ -2.19
Cpsf1Q9EPU4 Gm27711-201ENSMUST00000183802 118 ntBASIC1.39□□□□□ -2.19
Cpsf1Q9EPU4 Gm5731-201ENSMUST00000190969 481 ntBASIC1.39□□□□□ -2.19
Cpsf1Q9EPU4 Mir301-201ENSMUST00000083655 86 ntBASIC1.39□□□□□ -2.19
Cpsf1Q9EPU4 Gm14670-201ENSMUST00000117327 337 ntBASIC1.38□□□□□ -2.19
Cpsf1Q9EPU4 Gm22561-201ENSMUST00000157331 84 ntBASIC1.38□□□□□ -2.19
Cpsf1Q9EPU4 Gm24677-201ENSMUST00000158755 150 ntBASIC1.38□□□□□ -2.19
Cpsf1Q9EPU4 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Cpsf1Q9EPU4 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.38□□□□□ -2.19
Cpsf1Q9EPU4 Mir6540-201ENSMUST00000184886 108 ntBASIC1.38□□□□□ -2.19
Cpsf1Q9EPU4 Gm29603-201ENSMUST00000186792 334 ntBASIC1.38□□□□□ -2.19
Cpsf1Q9EPU4 Gm44332-201ENSMUST00000203712 433 ntBASIC1.38□□□□□ -2.19
Cpsf1Q9EPU4 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC1.38□□□□□ -2.19
Cpsf1Q9EPU4 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.38□□□□□ -2.19
Cpsf1Q9EPU4 Mir93-201ENSMUST00000083593 88 ntBASIC1.38□□□□□ -2.19
Cpsf1Q9EPU4 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Cpsf1Q9EPU4 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.38□□□□□ -2.19
Cpsf1Q9EPU4 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.38□□□□□ -2.19
Cpsf1Q9EPU4 Gm25994-201ENSMUST00000175392 101 ntBASIC1.37□□□□□ -2.19
Cpsf1Q9EPU4 Gm27520-201ENSMUST00000184872 81 ntBASIC1.37□□□□□ -2.19
Cpsf1Q9EPU4 Gm19649-201ENSMUST00000201126 822 ntBASIC1.37□□□□□ -2.19
Cpsf1Q9EPU4 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Cpsf1Q9EPU4 Gm14008-201ENSMUST00000120483 274 ntBASIC1.36□□□□□ -2.19
Cpsf1Q9EPU4 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.36□□□□□ -2.19
Cpsf1Q9EPU4 Gm15692-201ENSMUST00000152173 352 ntBASIC1.36□□□□□ -2.19
Cpsf1Q9EPU4 Gm23008-201ENSMUST00000158946 80 ntBASIC1.36□□□□□ -2.19
Cpsf1Q9EPU4 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.36□□□□□ -2.19
Cpsf1Q9EPU4 Gm29920-201ENSMUST00000206876 754 ntBASIC1.36□□□□□ -2.19
Cpsf1Q9EPU4 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Cpsf1Q9EPU4 CT009510.2-203ENSMUST00000226704 2136 ntBASIC1.36□□□□□ -2.19
Cpsf1Q9EPU4 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Cpsf1Q9EPU4 Gm14678-201ENSMUST00000121396 482 ntBASIC1.35□□□□□ -2.19
Cpsf1Q9EPU4 Gm25312-201ENSMUST00000178972 107 ntBASIC1.35□□□□□ -2.19
Cpsf1Q9EPU4 Gm45268-201ENSMUST00000210046 370 ntBASIC1.35□□□□□ -2.19
Cpsf1Q9EPU4 Gm18645-202ENSMUST00000212222 760 ntBASIC1.35□□□□□ -2.19
Cpsf1Q9EPU4 Gm42701-201ENSMUST00000196117 1657 ntBASIC1.35□□□□□ -2.19
Cpsf1Q9EPU4 Gm25787-201ENSMUST00000104709 92 ntBASIC1.34□□□□□ -2.19
Cpsf1Q9EPU4 Gm15659-201ENSMUST00000118881 341 ntBASIC1.34□□□□□ -2.19
Cpsf1Q9EPU4 Gm23588-201ENSMUST00000157659 99 ntBASIC1.34□□□□□ -2.19
Cpsf1Q9EPU4 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Cpsf1Q9EPU4 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Cpsf1Q9EPU4 Gm10925-201ENSMUST00000189941 678 ntBASIC1.34□□□□□ -2.19
Cpsf1Q9EPU4 Gm36638-201ENSMUST00000193295 400 ntBASIC1.34□□□□□ -2.19
Cpsf1Q9EPU4 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.34□□□□□ -2.19
Cpsf1Q9EPU4 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.34□□□□□ -2.19
Cpsf1Q9EPU4 Gm44830-201ENSMUST00000207667 584 ntBASIC1.34□□□□□ -2.19
Cpsf1Q9EPU4 AC132384.9-201ENSMUST00000218085 277 ntBASIC1.34□□□□□ -2.19
Cpsf1Q9EPU4 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.34□□□□□ -2.2
Cpsf1Q9EPU4 Gm14748-201ENSMUST00000119819 411 ntBASIC1.33□□□□□ -2.2
Cpsf1Q9EPU4 Gm25107-201ENSMUST00000122472 129 ntBASIC1.33□□□□□ -2.2
Cpsf1Q9EPU4 Gm23229-201ENSMUST00000157297 105 ntBASIC1.33□□□□□ -2.2
Cpsf1Q9EPU4 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC1.33□□□□□ -2.2
Cpsf1Q9EPU4 Gm9632-201ENSMUST00000195934 643 ntBASIC1.33□□□□□ -2.2
Cpsf1Q9EPU4 Gm18991-201ENSMUST00000209225 746 ntBASIC1.33□□□□□ -2.2
Cpsf1Q9EPU4 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cpsf1Q9EPU4 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.32□□□□□ -2.2
Cpsf1Q9EPU4 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Cpsf1Q9EPU4 Gm25730-201ENSMUST00000178753 165 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms