Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm9762-201ENSMUST00000036976 444 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm5471-201ENSMUST00000072732 337 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm24948-201ENSMUST00000082866 207 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm25411-201ENSMUST00000083760 151 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Gm37630-201ENSMUST00000194210 1456 ntBASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Gm13482-201ENSMUST00000119842 254 ntBASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Gm13913-201ENSMUST00000121126 260 ntBASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Gm22098-201ENSMUST00000157930 85 ntBASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Gm28637-201ENSMUST00000179424 345 ntBASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Gm28466-201ENSMUST00000190678 659 ntBASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Gm25820-202ENSMUST00000197479 128 ntBASIC2.16□□□□□ -2.06
Cdc40Q9DC48 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Gm43626-201ENSMUST00000198575 162 ntBASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Gm44477-201ENSMUST00000199661 110 ntBASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Gm18691-201ENSMUST00000203593 872 ntBASIC2.16□□□□□ -2.06
Cdc40Q9DC48 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Gm19326-201ENSMUST00000219818 326 ntBASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2.16□□□□□ -2.06
Cdc40Q9DC48 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Cdc40Q9DC48 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.15□□□□□ -2.06
Cdc40Q9DC48 Mir669d-201ENSMUST00000104644 121 ntBASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Gm11460-201ENSMUST00000118200 361 ntBASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Gm4732-201ENSMUST00000118778 473 ntBASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Gm15760-201ENSMUST00000119553 283 ntBASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Gm16412-201ENSMUST00000121602 273 ntBASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Gm12956-201ENSMUST00000122184 414 ntBASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Gm22452-201ENSMUST00000122804 104 ntBASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Gm23034-201ENSMUST00000158001 147 ntBASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Gm10177-202ENSMUST00000161698 207 ntBASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Gm22264-201ENSMUST00000178200 107 ntBASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Gm21726-201ENSMUST00000179654 392 ntBASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Gm27761-201ENSMUST00000184091 131 ntBASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Mir6925-201ENSMUST00000197857 70 ntBASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC2.15□□□□□ -2.07
Cdc40Q9DC48 AL669916.3-201ENSMUST00000213855 94 ntBASIC2.15□□□□□ -2.07
Cdc40Q9DC48 AL669916.6-201ENSMUST00000214610 94 ntBASIC2.15□□□□□ -2.07
Cdc40Q9DC48 AL669916.4-201ENSMUST00000215976 94 ntBASIC2.15□□□□□ -2.07
Cdc40Q9DC48 AL669916.1-201ENSMUST00000217640 94 ntBASIC2.15□□□□□ -2.07
Cdc40Q9DC48 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC2.15□□□□□ -2.07
Cdc40Q9DC48 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
Cdc40Q9DC48 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Cdc40Q9DC48 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Gm11813-201ENSMUST00000118586 291 ntBASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Gm12044-201ENSMUST00000120335 213 ntBASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Gm24911-201ENSMUST00000157292 136 ntBASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Gm24198-201ENSMUST00000157812 108 ntBASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Gm3221-201ENSMUST00000164869 440 ntBASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Gm24304-201ENSMUST00000177635 107 ntBASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Gm37743-201ENSMUST00000194645 376 ntBASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Gm8041-201ENSMUST00000199755 616 ntBASIC2.14□□□□□ -2.07
Cdc40Q9DC48 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.14□□□□□ -2.07
Cdc40Q9DC48 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Cdc40Q9DC48 CT009733.1-203ENSMUST00000224033 451 ntBASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Gm24610-201ENSMUST00000083270 109 ntBASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Gm23733-201ENSMUST00000083750 106 ntBASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Cdc40Q9DC48 Gm22151-201ENSMUST00000116963 58 ntBASIC2.13□□□□□ -2.07
Cdc40Q9DC48 Gm13510-201ENSMUST00000118659 429 ntBASIC2.13□□□□□ -2.07
Cdc40Q9DC48 Gm15497-201ENSMUST00000119137 551 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms