Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 AC123803.1-201ENSMUST00000216093 189 ntBASIC4.44□□□□□ -1.7
Trim42Q9D2H5 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC4.44□□□□□ -1.7
Trim42Q9D2H5 Gm18441-201ENSMUST00000223539 617 ntBASIC4.44□□□□□ -1.7
Trim42Q9D2H5 Gm22061-201ENSMUST00000082557 107 ntBASIC4.44□□□□□ -1.7
Trim42Q9D2H5 n-R5s173-201ENSMUST00000082620 119 ntBASIC4.44□□□□□ -1.7
Trim42Q9D2H5 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Trim42Q9D2H5 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trim42Q9D2H5 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim42Q9D2H5 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trim42Q9D2H5 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trim42Q9D2H5 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Gm22496-201ENSMUST00000104493 88 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Gm3267-201ENSMUST00000118671 473 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Gm22447-201ENSMUST00000158155 92 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Gm30341-201ENSMUST00000194363 289 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Gm36259-201ENSMUST00000197340 392 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Gm44054-201ENSMUST00000203814 372 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Gm44208-201ENSMUST00000205199 421 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Gm18991-201ENSMUST00000209225 746 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Gm45778-201ENSMUST00000211959 153 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Gm45907-201ENSMUST00000213023 193 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 AC105958.2-201ENSMUST00000214167 191 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Gm40692-201ENSMUST00000220411 491 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Gm20368-201ENSMUST00000220716 301 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Gm16419-201ENSMUST00000221057 625 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 AC108416.2-201ENSMUST00000226792 367 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 AC164304.1-201ENSMUST00000226920 272 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim42Q9D2H5 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Trim42Q9D2H5 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Mir466b-3-201ENSMUST00000103806 81 ntBASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Gm15313-201ENSMUST00000119179 282 ntBASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Defa-ps8-201ENSMUST00000120972 279 ntBASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Gm14810-201ENSMUST00000121628 486 ntBASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Gm26001-201ENSMUST00000157989 103 ntBASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Gm16162-201ENSMUST00000162296 297 ntBASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Gm26828-201ENSMUST00000180640 172 ntBASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Mir6372-201ENSMUST00000185114 109 ntBASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Gm20203-201ENSMUST00000192352 332 ntBASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Gm18325-201ENSMUST00000203228 835 ntBASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Gm45539-201ENSMUST00000210313 428 ntBASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Gm5358-201ENSMUST00000212814 353 ntBASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Gm6049-201ENSMUST00000222369 458 ntBASIC4.42□□□□□ -1.7
Trim42Q9D2H5 AC123533.1-201ENSMUST00000227782 446 ntBASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Gm23650-201ENSMUST00000083355 70 ntBASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Mir31-201ENSMUST00000083474 106 ntBASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim42Q9D2H5 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim42Q9D2H5 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trim42Q9D2H5 AC125223.3-201ENSMUST00000223588 2067 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Gm10059-201ENSMUST00000131139 171 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Gm22606-201ENSMUST00000158290 103 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Gm22767-201ENSMUST00000158365 165 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Gm22531-201ENSMUST00000158819 140 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Trim42Q9D2H5 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Gm28471-201ENSMUST00000185994 615 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Gm28598-201ENSMUST00000186490 615 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Gm29268-201ENSMUST00000188669 615 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Gm29218-205ENSMUST00000190846 615 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Gm37172-201ENSMUST00000191926 615 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Gm43724-201ENSMUST00000197516 226 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Gm2607-201ENSMUST00000212389 627 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 AC173345.2-201ENSMUST00000222795 153 ntBASIC4.41□□□□□ -1.7
Trim42Q9D2H5 AC183092.1-201ENSMUST00000224301 153 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms