Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm18667-201ENSMUST00000186523 484 ntBASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm20058-201ENSMUST00000186939 284 ntBASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm29288-201ENSMUST00000191582 901 ntBASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm37778-201ENSMUST00000191732 190 ntBASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm37449-201ENSMUST00000193016 270 ntBASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm18658-201ENSMUST00000195558 270 ntBASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm8041-201ENSMUST00000199755 616 ntBASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm9377-201ENSMUST00000207227 623 ntBASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm18729-201ENSMUST00000217230 621 ntBASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 AL645546.2-201ENSMUST00000224526 265 ntBASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 AC161758.1-201ENSMUST00000226123 310 ntBASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC1.91□□□□□ -2.1
Rpa3Q9CQ71 Gm2348-201ENSMUST00000108782 300 ntBASIC1.9□□□□□ -2.11
Rpa3Q9CQ71 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
Rpa3Q9CQ71 Gm15497-201ENSMUST00000119137 551 ntBASIC1.9□□□□□ -2.11
Rpa3Q9CQ71 Gm16355-201ENSMUST00000128606 231 ntBASIC1.9□□□□□ -2.11
Rpa3Q9CQ71 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
Rpa3Q9CQ71 Gm24858-201ENSMUST00000158058 323 ntBASIC1.9□□□□□ -2.11
Rpa3Q9CQ71 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.9□□□□□ -2.11
Rpa3Q9CQ71 Gm28163-201ENSMUST00000187099 325 ntBASIC1.9□□□□□ -2.11
Rpa3Q9CQ71 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.9□□□□□ -2.11
Rpa3Q9CQ71 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC1.9□□□□□ -2.11
Rpa3Q9CQ71 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC1.9□□□□□ -2.11
Rpa3Q9CQ71 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.9□□□□□ -2.11
Rpa3Q9CQ71 CT025525.2-201ENSMUST00000227743 423 ntBASIC1.9□□□□□ -2.11
Rpa3Q9CQ71 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Rpa3Q9CQ71 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Rpa3Q9CQ71 Gm26055-201ENSMUST00000083038 107 ntBASIC1.9□□□□□ -2.11
Rpa3Q9CQ71 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.9□□□□□ -2.11
Rpa3Q9CQ71 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
Rpa3Q9CQ71 Gm13343-201ENSMUST00000116474 105 ntBASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Gm8217-201ENSMUST00000119136 465 ntBASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Mup-ps4-201ENSMUST00000151005 539 ntBASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Gm25981-201ENSMUST00000157921 295 ntBASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Gm20415-201ENSMUST00000172877 423 ntBASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Gm24656-201ENSMUST00000177548 132 ntBASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Gm27342-201ENSMUST00000183530 109 ntBASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Mir7062-201ENSMUST00000185038 66 ntBASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Gm27964-201ENSMUST00000185195 62 ntBASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 AC122924.2-201ENSMUST00000220799 298 ntBASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Gm25813-201ENSMUST00000082748 191 ntBASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Gm23650-201ENSMUST00000083355 70 ntBASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Mir93-201ENSMUST00000083593 88 ntBASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.89□□□□□ -2.11
Rpa3Q9CQ71 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm22843-201ENSMUST00000157710 134 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm24572-201ENSMUST00000175505 88 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm20794-201ENSMUST00000177626 628 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Mir6379-201ENSMUST00000183392 115 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm27861-201ENSMUST00000183920 214 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm28356-202ENSMUST00000187566 858 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm20885-201ENSMUST00000190192 654 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm38281-201ENSMUST00000192301 315 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm33571-201ENSMUST00000193271 657 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm36866-201ENSMUST00000193343 657 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm36047-201ENSMUST00000193659 657 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm20857-201ENSMUST00000194766 657 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm20858-201ENSMUST00000195459 657 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm30638-201ENSMUST00000195570 656 ntBASIC1.88□□□□□ -2.11
Rpa3Q9CQ71 Gm43286-201ENSMUST00000197420 424 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms