Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm25350-201ENSMUST00000177849 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Snord116l15-201ENSMUST00000177940 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm23446-201ENSMUST00000177977 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Snord116l4-201ENSMUST00000177982 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm26201-201ENSMUST00000178047 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm24711-201ENSMUST00000178062 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm24609-201ENSMUST00000178166 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm23265-201ENSMUST00000178321 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm22812-201ENSMUST00000178329 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Snord116l3-201ENSMUST00000178370 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm26246-201ENSMUST00000178388 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm25155-201ENSMUST00000178450 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm24760-201ENSMUST00000178530 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm22285-201ENSMUST00000178576 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm22417-201ENSMUST00000178656 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Snord116l2-201ENSMUST00000178675 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm26270-201ENSMUST00000178690 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Snord116l16-201ENSMUST00000178777 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm23313-201ENSMUST00000178931 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Snord116l17-201ENSMUST00000178936 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm23089-201ENSMUST00000178947 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Snord116l10-201ENSMUST00000179053 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm24153-201ENSMUST00000179280 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm25597-201ENSMUST00000179388 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm25816-201ENSMUST00000179764 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm26188-201ENSMUST00000179963 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm26433-201ENSMUST00000180227 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm22128-201ENSMUST00000180346 94 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm7329-201ENSMUST00000185915 210 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm19193-201ENSMUST00000190263 590 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm37771-201ENSMUST00000193121 265 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm37869-201ENSMUST00000193385 595 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm43955-201ENSMUST00000204332 142 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm45105-201ENSMUST00000207824 397 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm24268-201ENSMUST00000082990 110 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Mir137-201ENSMUST00000083635 73 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Gm23847-201ENSMUST00000083829 110 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Nup88Q8CEC0 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Nup88Q8CEC0 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Gm15175-201ENSMUST00000117629 132 ntBASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Gm12878-201ENSMUST00000118744 332 ntBASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Gm12042-201ENSMUST00000120479 301 ntBASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Gm16428-201ENSMUST00000121193 723 ntBASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Gm25559-201ENSMUST00000157182 74 ntBASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Gm22098-201ENSMUST00000157930 85 ntBASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Gm22631-201ENSMUST00000179656 94 ntBASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Gm27869-201ENSMUST00000184327 122 ntBASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Gm43487-201ENSMUST00000200331 1031 ntBASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Gm6012-201ENSMUST00000210821 730 ntBASIC3.18□□□□□ -1.9
Nup88Q8CEC0 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Gm18113-201ENSMUST00000220630 303 ntBASIC3.18□□□□□ -1.9
Nup88Q8CEC0 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Nup88Q8CEC0 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Gm23128-201ENSMUST00000104257 132 ntBASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Gm14766-201ENSMUST00000121689 367 ntBASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Gm25808-201ENSMUST00000122784 284 ntBASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Gm22611-201ENSMUST00000158288 150 ntBASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Gm24681-201ENSMUST00000158760 107 ntBASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Mir3103-201ENSMUST00000175474 67 ntBASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Gm24264-201ENSMUST00000179835 94 ntBASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Gm27245-201ENSMUST00000184385 376 ntBASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Gm17946-201ENSMUST00000186856 538 ntBASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Gm32447-201ENSMUST00000194265 697 ntBASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Gm37029-201ENSMUST00000195773 239 ntBASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Gm23128-202ENSMUST00000196578 133 ntBASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC3.17□□□□□ -1.9
Nup88Q8CEC0 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 129 ms