Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Gm25764-201ENSMUST00000104092 134 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Gm25272-201ENSMUST00000104293 128 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Gm26147-201ENSMUST00000104479 114 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Gm14987-201ENSMUST00000117820 676 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Gm5762-201ENSMUST00000119204 258 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Gm11556-201ENSMUST00000120751 288 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Gm13692-201ENSMUST00000120774 371 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Gm22073-201ENSMUST00000122668 189 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Gm23411-201ENSMUST00000157988 62 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Mir1934-201ENSMUST00000158127 83 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Gm25860-201ENSMUST00000158252 126 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Gm26141-201ENSMUST00000175299 126 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Mir6338-201ENSMUST00000183389 109 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Gm28148-201ENSMUST00000186924 697 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Gm28629-201ENSMUST00000187309 263 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Gm42832-201ENSMUST00000196361 745 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 AC117588.2-201ENSMUST00000228340 311 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Mir452-201ENSMUST00000093629 85 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Gm22365-201ENSMUST00000093750 117 ntBASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trerf1Q8BXJ2 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm26145-201ENSMUST00000104476 127 ntBASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm12871-201ENSMUST00000118758 438 ntBASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm15760-201ENSMUST00000119553 283 ntBASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm8840-201ENSMUST00000122454 386 ntBASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm25902-201ENSMUST00000158493 318 ntBASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm24553-201ENSMUST00000158653 131 ntBASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm16038-201ENSMUST00000159317 193 ntBASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm20534-201ENSMUST00000172957 172 ntBASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm22621-201ENSMUST00000179678 74 ntBASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Mir8106-201ENSMUST00000184520 139 ntBASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm2189-201ENSMUST00000201419 429 ntBASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 AC122393.3-201ENSMUST00000226343 1059 ntBASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm24147-201ENSMUST00000082763 144 ntBASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.59□□□□□ -1.83
Trerf1Q8BXJ2 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Trerf1Q8BXJ2 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm24890-201ENSMUST00000104389 102 ntBASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm9157-201ENSMUST00000117673 225 ntBASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm14823-201ENSMUST00000117698 238 ntBASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm13873-201ENSMUST00000119208 427 ntBASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm6071-201ENSMUST00000119561 440 ntBASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm15167-201ENSMUST00000121997 187 ntBASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm12238-201ENSMUST00000127764 124 ntBASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm17148-201ENSMUST00000164702 249 ntBASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm8207-201ENSMUST00000171204 502 ntBASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm44794-201ENSMUST00000206550 411 ntBASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm17990-201ENSMUST00000211728 553 ntBASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 AC126554.1-201ENSMUST00000222161 271 ntBASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm25579-201ENSMUST00000083407 106 ntBASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trerf1Q8BXJ2 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trerf1Q8BXJ2 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trerf1Q8BXJ2 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
Trerf1Q8BXJ2 n-R5s202-201ENSMUST00000104517 114 ntBASIC3.57□□□□□ -1.84
Trerf1Q8BXJ2 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trerf1Q8BXJ2 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Trerf1Q8BXJ2 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms