Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm23592-201ENSMUST00000157859 117 ntBASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Gm28399-201ENSMUST00000186221 318 ntBASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Gm28572-201ENSMUST00000187444 318 ntBASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Gm28534-201ENSMUST00000187744 676 ntBASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Gm29365-201ENSMUST00000189461 699 ntBASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Gm42990-201ENSMUST00000199231 312 ntBASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC4.71□□□□□ -1.66
Usp40Q8BWR4 AC159203.2-201ENSMUST00000221326 193 ntBASIC4.71□□□□□ -1.66
Usp40Q8BWR4 AC108416.2-201ENSMUST00000226792 367 ntBASIC4.71□□□□□ -1.66
Usp40Q8BWR4 AC157572.3-201ENSMUST00000227288 303 ntBASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Gm23845-201ENSMUST00000083834 152 ntBASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Gm12412-201ENSMUST00000121867 328 ntBASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Gm26278-201ENSMUST00000157098 132 ntBASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Gm25390-201ENSMUST00000157341 103 ntBASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Gm22114-201ENSMUST00000177756 107 ntBASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Gm25361-201ENSMUST00000179358 76 ntBASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Gm27470-201ENSMUST00000184070 210 ntBASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Gm29140-201ENSMUST00000190187 476 ntBASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Gm38060-201ENSMUST00000194822 464 ntBASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC4.7□□□□□ -1.66
Usp40Q8BWR4 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.7□□□□□ -1.66
Usp40Q8BWR4 AC124346.1-201ENSMUST00000218539 364 ntBASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Gm45815-201ENSMUST00000220241 146 ntBASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4.7□□□□□ -1.66
Usp40Q8BWR4 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Gm23721-201ENSMUST00000083005 107 ntBASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Usp40Q8BWR4 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.7□□□□□ -1.66
Usp40Q8BWR4 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Usp40Q8BWR4 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Gm22831-201ENSMUST00000102473 109 ntBASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Snord98-201ENSMUST00000116819 65 ntBASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Gm14977-201ENSMUST00000121626 812 ntBASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Gm14298-201ENSMUST00000139032 237 ntBASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Gm16356-201ENSMUST00000143300 169 ntBASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Gm23902-201ENSMUST00000157571 134 ntBASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Gm24240-201ENSMUST00000157785 135 ntBASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Gm17072-201ENSMUST00000166673 658 ntBASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Mir6336-201ENSMUST00000183581 130 ntBASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Gm32340-201ENSMUST00000192883 259 ntBASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Gm37085-201ENSMUST00000193780 196 ntBASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Gm44016-201ENSMUST00000203463 164 ntBASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Gm45200-201ENSMUST00000207434 919 ntBASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Gm33654-201ENSMUST00000221704 215 ntBASIC4.69□□□□□ -1.66
Usp40Q8BWR4 AC154515.2-201ENSMUST00000226093 406 ntBASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Usp40Q8BWR4 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Usp40Q8BWR4 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Usp40Q8BWR4 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Usp40Q8BWR4 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Usp40Q8BWR4 Gm14296-202ENSMUST00000108931 750 ntBASIC4.68□□□□□ -1.66
Usp40Q8BWR4 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Usp40Q8BWR4 Nron-204ENSMUST00000158971 370 ntBASIC4.68□□□□□ -1.66
Usp40Q8BWR4 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC4.68□□□□□ -1.66
Usp40Q8BWR4 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC4.68□□□□□ -1.66
Usp40Q8BWR4 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Usp40Q8BWR4 Gm35405-201ENSMUST00000218754 400 ntBASIC4.68□□□□□ -1.66
Usp40Q8BWR4 Gm22358-201ENSMUST00000082877 122 ntBASIC4.68□□□□□ -1.66
Usp40Q8BWR4 Gm22628-201ENSMUST00000082988 107 ntBASIC4.68□□□□□ -1.66
Usp40Q8BWR4 Gm25188-201ENSMUST00000083913 122 ntBASIC4.68□□□□□ -1.66
Usp40Q8BWR4 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Usp40Q8BWR4 Gm38286-201ENSMUST00000195128 3105 ntBASIC4.68□□□□□ -1.66
Usp40Q8BWR4 Gm8935-202ENSMUST00000105727 1959 ntBASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Usp40Q8BWR4 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Gm22023-201ENSMUST00000104354 130 ntBASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Gm23705-201ENSMUST00000104370 130 ntBASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Gm13155-201ENSMUST00000119277 646 ntBASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Gm8178-201ENSMUST00000121570 646 ntBASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Gm22956-201ENSMUST00000122520 80 ntBASIC4.67□□□□□ -1.66
Usp40Q8BWR4 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms