Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.63□□□□□ -1.99
Ccdc40Q8BI79 AC113031.5-201ENSMUST00000227116 606 ntBASIC2.63□□□□□ -1.99
Ccdc40Q8BI79 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.63□□□□□ -1.99
Ccdc40Q8BI79 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Ccdc40Q8BI79 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Ccdc40Q8BI79 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Gm13331-201ENSMUST00000117500 448 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Gm22143-201ENSMUST00000157401 203 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Gm24784-201ENSMUST00000157640 62 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Gm24958-201ENSMUST00000158009 97 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Gm23402-201ENSMUST00000178130 107 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Gm18692-201ENSMUST00000193047 511 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Gm42805-201ENSMUST00000196158 276 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Gm44609-201ENSMUST00000207157 460 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Gm46103-201ENSMUST00000217614 341 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Gm7065-201ENSMUST00000222150 474 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Gm25582-201ENSMUST00000083412 110 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Gm23848-201ENSMUST00000083826 106 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Gm14445-201ENSMUST00000117051 1484 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
Ccdc40Q8BI79 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Gm23744-201ENSMUST00000104231 149 ntBASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Gm11065-201ENSMUST00000111462 228 ntBASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Gm12191-201ENSMUST00000118307 348 ntBASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Gm9703-201ENSMUST00000119573 343 ntBASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Gm23078-201ENSMUST00000157848 148 ntBASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Gm16232-201ENSMUST00000162856 167 ntBASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Mir7013-201ENSMUST00000183540 72 ntBASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Gm27245-201ENSMUST00000184385 376 ntBASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Gm28825-201ENSMUST00000186233 238 ntBASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Mir7232-201ENSMUST00000197929 74 ntBASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Gm45879-201ENSMUST00000212521 392 ntBASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Gm45772-201ENSMUST00000212961 240 ntBASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Gm10343-201ENSMUST00000096279 348 ntBASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Ccdc40Q8BI79 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 Gm25088-201ENSMUST00000101803 79 ntBASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 Gm26414-201ENSMUST00000157674 269 ntBASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 Gm23223-201ENSMUST00000158119 127 ntBASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 Gm22947-201ENSMUST00000158559 91 ntBASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 Gm15900-201ENSMUST00000161584 342 ntBASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 Gm17064-201ENSMUST00000167690 452 ntBASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 Gm28951-201ENSMUST00000190742 313 ntBASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 Gm32033-201ENSMUST00000193483 339 ntBASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 Gm43264-201ENSMUST00000202284 325 ntBASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 Gm10297-201ENSMUST00000207136 651 ntBASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 Gm3563-201ENSMUST00000172963 1628 ntBASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
Ccdc40Q8BI79 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.59□□□□□ -1.99
Ccdc40Q8BI79 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Ccdc40Q8BI79 Zfp640-202ENSMUST00000224116 1562 ntBASIC2.59□□□□□ -1.99
Ccdc40Q8BI79 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Ccdc40Q8BI79 Mir1193-201ENSMUST00000116761 121 ntBASIC2.59□□□□□ -1.99
Ccdc40Q8BI79 Gm13876-201ENSMUST00000118451 261 ntBASIC2.59□□□□□ -1.99
Ccdc40Q8BI79 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.59□□□□□ -1.99
Ccdc40Q8BI79 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.59□□□□□ -1.99
Ccdc40Q8BI79 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.59□□□□□ -1.99
Ccdc40Q8BI79 Gm27249-201ENSMUST00000185049 328 ntBASIC2.59□□□□□ -1.99
Ccdc40Q8BI79 AC156795.1-201ENSMUST00000214655 414 ntBASIC2.59□□□□□ -1.99
Ccdc40Q8BI79 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.59□□□□□ -1.99
Ccdc40Q8BI79 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.59□□□□□ -1.99
Ccdc40Q8BI79 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.59□□□□□ -1.99
Ccdc40Q8BI79 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.59□□□□□ -1.99
Ccdc40Q8BI79 Gm24707-201ENSMUST00000082812 107 ntBASIC2.59□□□□□ -1.99
Ccdc40Q8BI79 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.59□□□□□ -2
Ccdc40Q8BI79 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Ccdc40Q8BI79 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Ccdc40Q8BI79 Mir682-201ENSMUST00000102281 96 ntBASIC2.58□□□□□ -2
Ccdc40Q8BI79 Gm12636-201ENSMUST00000117395 624 ntBASIC2.58□□□□□ -2
Ccdc40Q8BI79 Gm14899-201ENSMUST00000118673 548 ntBASIC2.58□□□□□ -2
Ccdc40Q8BI79 Gm16021-201ENSMUST00000121176 219 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms