Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm23175-201ENSMUST00000104371 132 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm25507-201ENSMUST00000116981 144 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm13085-201ENSMUST00000118356 171 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm14293-201ENSMUST00000118528 577 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm7327-201ENSMUST00000120925 652 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm11456-201ENSMUST00000121070 256 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm11849-201ENSMUST00000121293 261 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm14766-201ENSMUST00000121689 367 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm14765-201ENSMUST00000121954 326 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm6568-201ENSMUST00000122274 697 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 n-R5s207-201ENSMUST00000122497 118 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm24291-201ENSMUST00000157633 162 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm22098-201ENSMUST00000157930 85 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm23068-201ENSMUST00000158239 293 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm23704-201ENSMUST00000158844 340 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm24019-201ENSMUST00000178620 107 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm26243-201ENSMUST00000179260 107 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Mir6371-201ENSMUST00000184470 111 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm8392-201ENSMUST00000185647 835 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm18964-201ENSMUST00000193013 563 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Trbv24-201ENSMUST00000194614 347 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm19202-201ENSMUST00000198096 808 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm43955-201ENSMUST00000204332 142 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm44526-201ENSMUST00000204664 121 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm44472-201ENSMUST00000204922 943 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 AC153526.1-201ENSMUST00000219750 190 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm23296-201ENSMUST00000082555 107 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Gm24859-201ENSMUST00000082729 107 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Snord38a-201ENSMUST00000083746 71 ntBASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Atg4bQ8BGE6 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Gm12191-201ENSMUST00000118307 348 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Gm11285-201ENSMUST00000118443 322 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Gm13510-201ENSMUST00000118659 429 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Gm9703-201ENSMUST00000119573 343 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Gm16428-201ENSMUST00000121193 723 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Gm22793-201ENSMUST00000157227 330 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Gm22538-201ENSMUST00000158169 299 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Mir3965-201ENSMUST00000175570 69 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Gm22166-201ENSMUST00000178419 121 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Gm23288-201ENSMUST00000179213 121 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Gm28404-201ENSMUST00000190242 453 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Gm19193-201ENSMUST00000190263 590 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Gm37771-201ENSMUST00000193121 265 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Gm37869-201ENSMUST00000193385 595 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Gm44818-201ENSMUST00000206608 358 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Gm45687-201ENSMUST00000209454 155 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Mir137-201ENSMUST00000083635 73 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Gm26108-201ENSMUST00000083973 191 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Gm10343-201ENSMUST00000096279 348 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Atg4bQ8BGE6 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Gm2066-201ENSMUST00000118046 389 ntBASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Gm9043-201ENSMUST00000119677 314 ntBASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Gm26275-201ENSMUST00000157101 268 ntBASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Gm25624-201ENSMUST00000157222 275 ntBASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Gm22563-201ENSMUST00000157333 269 ntBASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Gm22555-201ENSMUST00000157801 62 ntBASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Gm25373-201ENSMUST00000158156 115 ntBASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Gm24757-201ENSMUST00000176987 371 ntBASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Gm22633-201ENSMUST00000179834 107 ntBASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Gm23144-201ENSMUST00000180226 107 ntBASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Gm27957-201ENSMUST00000184054 127 ntBASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Gm27245-201ENSMUST00000184385 376 ntBASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Gm19257-201ENSMUST00000186121 183 ntBASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 Gm44181-201ENSMUST00000203106 483 ntBASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 AC120394.1-201ENSMUST00000217153 351 ntBASIC2.48□□□□□ -2.01
Atg4bQ8BGE6 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms