Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm25781-201ENSMUST00000122527 84 ntBASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Gm23956-201ENSMUST00000157211 119 ntBASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Gm23752-201ENSMUST00000157584 115 ntBASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Gm7925-201ENSMUST00000166690 401 ntBASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Gm25360-201ENSMUST00000178786 191 ntBASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Mir6413-201ENSMUST00000184049 108 ntBASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Gm28700-201ENSMUST00000187614 579 ntBASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Gm37054-201ENSMUST00000193481 543 ntBASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Gm37290-201ENSMUST00000195775 339 ntBASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Gm44084-201ENSMUST00000203947 409 ntBASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Gm44718-201ENSMUST00000206886 359 ntBASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Gm36776-201ENSMUST00000207006 203 ntBASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 AC147240.1-201ENSMUST00000218767 431 ntBASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Gm7422-201ENSMUST00000220115 640 ntBASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 AC163357.1-201ENSMUST00000220847 233 ntBASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Gm22247-201ENSMUST00000082476 131 ntBASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Gm24533-201ENSMUST00000083138 196 ntBASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Gm22739-201ENSMUST00000083437 160 ntBASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Ubfd1Q78JW9 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Gm24127-201ENSMUST00000104110 130 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Gm24275-201ENSMUST00000116780 146 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Mir669i-201ENSMUST00000117007 127 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Gm13153-201ENSMUST00000120969 637 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Gm24936-201ENSMUST00000122598 247 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Gm16289-201ENSMUST00000162079 183 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Gm3027-201ENSMUST00000167579 451 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Mir5136-201ENSMUST00000175573 76 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Gm27535-201ENSMUST00000183814 157 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Gm29229-201ENSMUST00000188874 323 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Gm28069-201ENSMUST00000189926 214 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Gm28155-201ENSMUST00000191066 151 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Gm37104-201ENSMUST00000193278 196 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Gm18551-201ENSMUST00000195594 642 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Gm35405-201ENSMUST00000218754 400 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.36□□□□□ -1.87
Ubfd1Q78JW9 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Gm18360-201ENSMUST00000173327 1524 ntBASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Gm12897-201ENSMUST00000120341 250 ntBASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Gm14810-201ENSMUST00000121628 486 ntBASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Gm29452-201ENSMUST00000187996 313 ntBASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Gm28314-201ENSMUST00000191276 345 ntBASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Gm44446-201ENSMUST00000204864 255 ntBASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Gm23042-201ENSMUST00000083866 101 ntBASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Gm25207-201ENSMUST00000093745 107 ntBASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.35□□□□□ -1.87
Ubfd1Q78JW9 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Mir759-201ENSMUST00000103254 98 ntBASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Snord98-201ENSMUST00000116819 65 ntBASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Gm13085-201ENSMUST00000118356 171 ntBASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Gm12819-201ENSMUST00000122223 629 ntBASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Gm13424-201ENSMUST00000122301 354 ntBASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Gm22718-201ENSMUST00000122701 315 ntBASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Gm6265-201ENSMUST00000149263 231 ntBASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Gm26100-201ENSMUST00000157245 127 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms