Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm17522-201ENSMUST00000178144 498 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm21599-201ENSMUST00000178249 498 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm21914-201ENSMUST00000178452 498 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm21723-201ENSMUST00000178692 498 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm21916-201ENSMUST00000178771 498 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm21801-201ENSMUST00000178865 498 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm21633-201ENSMUST00000178941 498 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm21821-201ENSMUST00000179646 498 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm21588-201ENSMUST00000180074 498 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm21780-201ENSMUST00000180128 498 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm21572-201ENSMUST00000180134 498 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm21529-201ENSMUST00000180175 498 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Mir6335-201ENSMUST00000184081 98 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm29602-201ENSMUST00000186887 442 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm29370-202ENSMUST00000187476 499 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm43415-201ENSMUST00000201934 750 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 CT025606.1-201ENSMUST00000218273 324 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm19326-201ENSMUST00000219818 326 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm23614-201ENSMUST00000082598 107 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm23615-201ENSMUST00000082602 65 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Gm26263-201ENSMUST00000083281 164 ntBASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Smarca1Q6PGB8 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Gm22939-201ENSMUST00000103958 131 ntBASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Gm20543-201ENSMUST00000174200 726 ntBASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Gm24418-201ENSMUST00000177597 79 ntBASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Gm24639-201ENSMUST00000178518 79 ntBASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Gm23076-201ENSMUST00000179082 79 ntBASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Gm25077-201ENSMUST00000179157 79 ntBASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Gm28358-202ENSMUST00000189292 223 ntBASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Gm7871-201ENSMUST00000195346 618 ntBASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Gm45513-201ENSMUST00000210228 376 ntBASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Gm45252-201ENSMUST00000211579 397 ntBASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Gm7692-201ENSMUST00000213534 409 ntBASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 AC131720.2-201ENSMUST00000220420 431 ntBASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 AC167192.2-201ENSMUST00000224794 198 ntBASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Gm22154-201ENSMUST00000083844 131 ntBASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Smarca1Q6PGB8 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.4□□□□□ -1.86
Smarca1Q6PGB8 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.4□□□□□ -1.86
Smarca1Q6PGB8 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Smarca1Q6PGB8 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Smarca1Q6PGB8 Gm24068-201ENSMUST00000104513 132 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Gm14971-201ENSMUST00000117980 663 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Gm5937-201ENSMUST00000119715 643 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Gm7916-201ENSMUST00000120325 456 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Gm14364-201ENSMUST00000129209 267 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Gm26414-201ENSMUST00000157674 269 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Gm24168-201ENSMUST00000178825 107 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Gm23862-201ENSMUST00000180342 94 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Gm9022-202ENSMUST00000183285 483 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Gm32447-201ENSMUST00000194265 697 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Gm43402-201ENSMUST00000197159 159 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Gm45344-201ENSMUST00000211610 341 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Gm46233-201ENSMUST00000217831 449 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Gm46312-201ENSMUST00000220961 420 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Gm19563-201ENSMUST00000222031 270 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Ear14-201ENSMUST00000049559 468 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Gm25257-201ENSMUST00000083907 110 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Gm10212-201ENSMUST00000087884 324 ntBASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Smarca1Q6PGB8 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Gm24671-201ENSMUST00000104159 158 ntBASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Gm14841-201ENSMUST00000121067 758 ntBASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Gm23332-201ENSMUST00000157424 275 ntBASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Gm22961-201ENSMUST00000157964 106 ntBASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Igkv17-134-201ENSMUST00000168310 348 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms