Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Gm22229-201ENSMUST00000082987 108 ntBASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Gm23136-201ENSMUST00000083425 99 ntBASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Gm42585-201ENSMUST00000198731 4020 ntBASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Gm43715-201ENSMUST00000196307 2715 ntBASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm13804-201ENSMUST00000119552 172 ntBASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm12433-201ENSMUST00000119659 255 ntBASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm12876-201ENSMUST00000120975 408 ntBASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm25270-201ENSMUST00000122606 138 ntBASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm22563-201ENSMUST00000157333 269 ntBASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm21827-201ENSMUST00000178247 423 ntBASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm23144-201ENSMUST00000180226 107 ntBASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Mir6341-201ENSMUST00000183490 121 ntBASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm27245-201ENSMUST00000184385 376 ntBASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm7871-201ENSMUST00000195346 618 ntBASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm37029-201ENSMUST00000195773 239 ntBASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm18341-201ENSMUST00000197538 622 ntBASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm29809-201ENSMUST00000218423 493 ntBASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm19441-201ENSMUST00000221545 330 ntBASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm10088-201ENSMUST00000074116 423 ntBASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm24268-201ENSMUST00000082990 110 ntBASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Gm23097-201ENSMUST00000083448 105 ntBASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Snrnp40Q6PE01 AC153887.2-201ENSMUST00000219160 3838 ntBASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Gm22098-201ENSMUST00000157930 85 ntBASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Gm26061-201ENSMUST00000175584 108 ntBASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Gm23186-201ENSMUST00000180078 107 ntBASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Gm27470-201ENSMUST00000184070 210 ntBASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Gm17946-201ENSMUST00000186856 538 ntBASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Gm28151-201ENSMUST00000189404 951 ntBASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Gm9696-202ENSMUST00000191541 830 ntBASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Gm42647-201ENSMUST00000195939 459 ntBASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Gm44472-201ENSMUST00000204922 943 ntBASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 AC116589.1-201ENSMUST00000220634 327 ntBASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Gm35558-203ENSMUST00000222264 204 ntBASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 AC134420.1-201ENSMUST00000227027 289 ntBASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Gm45540-201ENSMUST00000209271 3606 ntBASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Gm14415-201ENSMUST00000118260 1578 ntBASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Snrnp40Q6PE01 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Mir344c-201ENSMUST00000103919 92 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm12191-201ENSMUST00000118307 348 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm9703-201ENSMUST00000119573 343 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm12213-201ENSMUST00000119924 353 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm13581-201ENSMUST00000120675 278 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm14362-201ENSMUST00000121679 273 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm15254-201ENSMUST00000149567 273 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm22131-201ENSMUST00000178415 94 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm25360-201ENSMUST00000178786 191 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm11395-201ENSMUST00000181011 499 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm19193-201ENSMUST00000190263 590 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm18291-201ENSMUST00000190791 301 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm9227-201ENSMUST00000194733 566 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 130.5 ms