Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Gm8121-201ENSMUST00000153583 499 ntBASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Mir1942-201ENSMUST00000157274 63 ntBASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Gm23262-201ENSMUST00000158323 168 ntBASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Gm22766-201ENSMUST00000158372 99 ntBASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Mir7056-201ENSMUST00000183776 59 ntBASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Gm28058-201ENSMUST00000186421 264 ntBASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Gm29428-201ENSMUST00000190086 409 ntBASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Gm37338-201ENSMUST00000191986 127 ntBASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Gm44032-201ENSMUST00000204841 166 ntBASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 AC126267.1-201ENSMUST00000214282 284 ntBASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Gm23679-201ENSMUST00000083161 119 ntBASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Gm15896-201ENSMUST00000118045 440 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Gm14020-201ENSMUST00000118165 662 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Gm25325-201ENSMUST00000122559 86 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Gm22108-201ENSMUST00000177961 106 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Gm24798-201ENSMUST00000179334 106 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Gm25121-201ENSMUST00000179846 79 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Gm6802-202ENSMUST00000186566 126 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Gm28951-201ENSMUST00000190742 313 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Gm1833-201ENSMUST00000191608 682 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Gm43604-201ENSMUST00000199799 705 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Gm23928-201ENSMUST00000082469 145 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Gm26457-201ENSMUST00000082678 78 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Mir137-201ENSMUST00000083635 73 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 AC122887.2-201ENSMUST00000219465 1603 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Rnf220Q6PDX6 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm11698-201ENSMUST00000117948 455 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm13692-201ENSMUST00000120774 371 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm12785-201ENSMUST00000122052 172 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm23586-201ENSMUST00000157657 123 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm24997-201ENSMUST00000157910 105 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm25369-201ENSMUST00000158848 132 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm6374-201ENSMUST00000159051 788 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Mir5127-201ENSMUST00000175295 71 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm23799-201ENSMUST00000175559 120 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm27921-201ENSMUST00000183968 108 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm20923-201ENSMUST00000190009 319 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm21088-201ENSMUST00000190875 316 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm38270-201ENSMUST00000192721 407 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm37361-201ENSMUST00000194345 132 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Gm15101-201ENSMUST00000178818 1502 ntBASIC3.6□□□□□ -1.83
Rnf220Q6PDX6 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Rnf220Q6PDX6 Gm23142-201ENSMUST00000101848 105 ntBASIC3.59□□□□□ -1.83
Rnf220Q6PDX6 Gm26240-201ENSMUST00000101893 105 ntBASIC3.59□□□□□ -1.83
Rnf220Q6PDX6 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Rnf220Q6PDX6 Gm14919-201ENSMUST00000120839 390 ntBASIC3.59□□□□□ -1.83
Rnf220Q6PDX6 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.59□□□□□ -1.83
Rnf220Q6PDX6 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.59□□□□□ -1.83
Rnf220Q6PDX6 Gm26085-201ENSMUST00000157900 116 ntBASIC3.59□□□□□ -1.83
Rnf220Q6PDX6 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Rnf220Q6PDX6 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Rnf220Q6PDX6 Gm27564-201ENSMUST00000185196 96 ntBASIC3.59□□□□□ -1.83
Rnf220Q6PDX6 Gm37603-201ENSMUST00000192368 219 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms