Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Gm22496-201ENSMUST00000104493 88 ntBASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Gm23226-201ENSMUST00000116927 103 ntBASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Gm11785-201ENSMUST00000120165 601 ntBASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Gm23956-201ENSMUST00000157211 119 ntBASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Gm26028-201ENSMUST00000158660 294 ntBASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Gm24224-201ENSMUST00000158828 258 ntBASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Gm26337-201ENSMUST00000178000 79 ntBASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Gm19503-201ENSMUST00000187109 241 ntBASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Gm37162-201ENSMUST00000191708 551 ntBASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Gm43193-201ENSMUST00000197732 441 ntBASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Gm35702-201ENSMUST00000198653 511 ntBASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Gm44259-201ENSMUST00000204996 298 ntBASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Gm22350-201ENSMUST00000083924 156 ntBASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Gm42659-201ENSMUST00000196955 1754 ntBASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Cpsf6Q6NVF9 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Gm24788-201ENSMUST00000104283 156 ntBASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Gm12902-201ENSMUST00000118389 322 ntBASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Gm5396-201ENSMUST00000121222 532 ntBASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Gm23466-201ENSMUST00000157133 106 ntBASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Gm25115-201ENSMUST00000157187 140 ntBASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Gm25716-201ENSMUST00000158628 104 ntBASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Gm27899-201ENSMUST00000184715 64 ntBASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Gm2950-201ENSMUST00000185530 520 ntBASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Gm43649-201ENSMUST00000196596 391 ntBASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 AC154213.2-201ENSMUST00000227138 187 ntBASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Gm6462-201ENSMUST00000081488 304 ntBASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Gm24204-201ENSMUST00000082950 107 ntBASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
Cpsf6Q6NVF9 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Gm23319-201ENSMUST00000104467 131 ntBASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Gm9003-201ENSMUST00000121810 482 ntBASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Gm16218-201ENSMUST00000155424 388 ntBASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Gm22989-201ENSMUST00000158313 86 ntBASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Gm2389-201ENSMUST00000160487 189 ntBASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Gm27414-201ENSMUST00000185033 381 ntBASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Gm29428-201ENSMUST00000190086 409 ntBASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Gm4714-201ENSMUST00000203395 279 ntBASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Gm44032-201ENSMUST00000204841 166 ntBASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Mir146-201ENSMUST00000083667 65 ntBASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Gm24762-201ENSMUST00000083689 104 ntBASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Cpsf6Q6NVF9 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.01□□□□□ -1.77
Cpsf6Q6NVF9 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Cpsf6Q6NVF9 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Cpsf6Q6NVF9 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC4.01□□□□□ -1.77
Cpsf6Q6NVF9 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.01□□□□□ -1.77
Cpsf6Q6NVF9 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Cpsf6Q6NVF9 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Cpsf6Q6NVF9 Gm12550-201ENSMUST00000118478 329 ntBASIC4.01□□□□□ -1.77
Cpsf6Q6NVF9 Gm14586-201ENSMUST00000119571 408 ntBASIC4.01□□□□□ -1.77
Cpsf6Q6NVF9 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.01□□□□□ -1.77
Cpsf6Q6NVF9 Gm22767-201ENSMUST00000158365 165 ntBASIC4.01□□□□□ -1.77
Cpsf6Q6NVF9 Gm22135-201ENSMUST00000158752 108 ntBASIC4.01□□□□□ -1.77
Cpsf6Q6NVF9 Gm43978-201ENSMUST00000203491 451 ntBASIC4.01□□□□□ -1.77
Cpsf6Q6NVF9 Gm7468-201ENSMUST00000203900 652 ntBASIC4.01□□□□□ -1.77
Cpsf6Q6NVF9 Gm19366-201ENSMUST00000206996 156 ntBASIC4.01□□□□□ -1.77
Cpsf6Q6NVF9 Gm26314-201ENSMUST00000083891 107 ntBASIC4.01□□□□□ -1.77
Cpsf6Q6NVF9 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Cpsf6Q6NVF9 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Cpsf6Q6NVF9 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms