Protein–RNA interactions for Protein: Q66JQ7

Knl1, Kinetochore scaffold 1, mousemouse

Predictions only

Length 1,612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Knl1Q66JQ7 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
Knl1Q66JQ7 Gm8207-201ENSMUST00000171204 502 ntBASIC1.54□□□□□ -2.16
Knl1Q66JQ7 Gm44403-201ENSMUST00000198554 129 ntBASIC1.54□□□□□ -2.16
Knl1Q66JQ7 Gm43578-201ENSMUST00000201250 459 ntBASIC1.54□□□□□ -2.16
Knl1Q66JQ7 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC1.54□□□□□ -2.16
Knl1Q66JQ7 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Knl1Q66JQ7 AC158395.1-201ENSMUST00000227206 452 ntBASIC1.54□□□□□ -2.16
Knl1Q66JQ7 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.53□□□□□ -2.16
Knl1Q66JQ7 Gm37418-201ENSMUST00000195031 274 ntBASIC1.53□□□□□ -2.16
Knl1Q66JQ7 Gm36997-201ENSMUST00000195090 707 ntBASIC1.53□□□□□ -2.16
Knl1Q66JQ7 Gm43541-201ENSMUST00000197208 581 ntBASIC1.53□□□□□ -2.16
Knl1Q66JQ7 Gm44462-201ENSMUST00000199696 129 ntBASIC1.53□□□□□ -2.16
Knl1Q66JQ7 AC159293.2-201ENSMUST00000222289 424 ntBASIC1.53□□□□□ -2.16
Knl1Q66JQ7 Gm12137-201ENSMUST00000119565 346 ntBASIC1.52□□□□□ -2.17
Knl1Q66JQ7 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC1.52□□□□□ -2.17
Knl1Q66JQ7 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.52□□□□□ -2.17
Knl1Q66JQ7 Snora24-201ENSMUST00000174989 130 ntBASIC1.52□□□□□ -2.17
Knl1Q66JQ7 Gm29263-201ENSMUST00000188718 463 ntBASIC1.52□□□□□ -2.17
Knl1Q66JQ7 Gm28384-201ENSMUST00000189079 463 ntBASIC1.52□□□□□ -2.17
Knl1Q66JQ7 Gm37934-201ENSMUST00000192902 402 ntBASIC1.52□□□□□ -2.17
Knl1Q66JQ7 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Knl1Q66JQ7 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.52□□□□□ -2.17
Knl1Q66JQ7 Snord14a-201ENSMUST00000082807 87 ntBASIC1.52□□□□□ -2.17
Knl1Q66JQ7 Mir27b-201ENSMUST00000083541 73 ntBASIC1.52□□□□□ -2.17
Knl1Q66JQ7 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.52□□□□□ -2.17
Knl1Q66JQ7 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Knl1Q66JQ7 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.52□□□□□ -2.17
Knl1Q66JQ7 Gm24951-201ENSMUST00000102182 109 ntBASIC1.51□□□□□ -2.17
Knl1Q66JQ7 Gm25901-201ENSMUST00000158494 130 ntBASIC1.51□□□□□ -2.17
Knl1Q66JQ7 Gm24878-201ENSMUST00000158782 104 ntBASIC1.51□□□□□ -2.17
Knl1Q66JQ7 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC1.51□□□□□ -2.17
Knl1Q66JQ7 Gm27419-201ENSMUST00000184576 109 ntBASIC1.51□□□□□ -2.17
Knl1Q66JQ7 Gm37005-201ENSMUST00000193281 1164 ntBASIC1.51□□□□□ -2.17
Knl1Q66JQ7 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC1.51□□□□□ -2.17
Knl1Q66JQ7 Gm44052-201ENSMUST00000203382 396 ntBASIC1.51□□□□□ -2.17
Knl1Q66JQ7 AC122465.3-201ENSMUST00000221644 355 ntBASIC1.51□□□□□ -2.17
Knl1Q66JQ7 CT030166.1-201ENSMUST00000222654 357 ntBASIC1.51□□□□□ -2.17
Knl1Q66JQ7 AC163664.1-201ENSMUST00000226251 1248 ntBASIC1.51□□□□□ -2.17
Knl1Q66JQ7 Gm25755-201ENSMUST00000083396 107 ntBASIC1.51□□□□□ -2.17
Knl1Q66JQ7 Gm24445-201ENSMUST00000083981 107 ntBASIC1.51□□□□□ -2.17
Knl1Q66JQ7 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Knl1Q66JQ7 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.51□□□□□ -2.17
Knl1Q66JQ7 Gm22561-201ENSMUST00000157331 84 ntBASIC1.51□□□□□ -2.17
Knl1Q66JQ7 Gm22389-201ENSMUST00000158193 301 ntBASIC1.51□□□□□ -2.17
Knl1Q66JQ7 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.51□□□□□ -2.17
Knl1Q66JQ7 Gm17935-201ENSMUST00000196649 772 ntBASIC1.51□□□□□ -2.17
Knl1Q66JQ7 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
Knl1Q66JQ7 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Knl1Q66JQ7 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Knl1Q66JQ7 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Knl1Q66JQ7 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Knl1Q66JQ7 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.5□□□□□ -2.17
Knl1Q66JQ7 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Knl1Q66JQ7 Mir19b-1-201ENSMUST00000102301 87 ntBASIC1.5□□□□□ -2.17
Knl1Q66JQ7 Gm13239-201ENSMUST00000119920 637 ntBASIC1.5□□□□□ -2.17
Knl1Q66JQ7 Gm24288-201ENSMUST00000157630 144 ntBASIC1.5□□□□□ -2.17
Knl1Q66JQ7 Nron-204ENSMUST00000158971 370 ntBASIC1.5□□□□□ -2.17
Knl1Q66JQ7 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.5□□□□□ -2.17
Knl1Q66JQ7 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Knl1Q66JQ7 Gm44274-201ENSMUST00000203417 256 ntBASIC1.5□□□□□ -2.17
Knl1Q66JQ7 Gm43865-201ENSMUST00000204721 127 ntBASIC1.5□□□□□ -2.17
Knl1Q66JQ7 Gm45365-201ENSMUST00000209489 256 ntBASIC1.5□□□□□ -2.17
Knl1Q66JQ7 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.5□□□□□ -2.17
Knl1Q66JQ7 Gm23718-201ENSMUST00000157350 307 ntBASIC1.49□□□□□ -2.17
Knl1Q66JQ7 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.49□□□□□ -2.17
Knl1Q66JQ7 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Knl1Q66JQ7 Gm12006-201ENSMUST00000120786 403 ntBASIC1.48□□□□□ -2.17
Knl1Q66JQ7 Gm13577-201ENSMUST00000121365 205 ntBASIC1.48□□□□□ -2.17
Knl1Q66JQ7 Gm18406-201ENSMUST00000185872 669 ntBASIC1.48□□□□□ -2.17
Knl1Q66JQ7 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.48□□□□□ -2.17
Knl1Q66JQ7 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC1.48□□□□□ -2.17
Knl1Q66JQ7 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.48□□□□□ -2.17
Knl1Q66JQ7 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Knl1Q66JQ7 Gm13082-201ENSMUST00000118877 561 ntBASIC1.48□□□□□ -2.17
Knl1Q66JQ7 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.48□□□□□ -2.17
Knl1Q66JQ7 Gm18964-201ENSMUST00000193013 563 ntBASIC1.48□□□□□ -2.17
Knl1Q66JQ7 Gm43652-201ENSMUST00000196219 675 ntBASIC1.48□□□□□ -2.17
Knl1Q66JQ7 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Knl1Q66JQ7 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.47□□□□□ -2.17
Knl1Q66JQ7 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Knl1Q66JQ7 Trbv6-201ENSMUST00000193743 276 ntBASIC1.47□□□□□ -2.17
Knl1Q66JQ7 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Knl1Q66JQ7 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.47□□□□□ -2.17
Knl1Q66JQ7 Gm44446-201ENSMUST00000204864 255 ntBASIC1.47□□□□□ -2.17
Knl1Q66JQ7 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.47□□□□□ -2.17
Knl1Q66JQ7 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.47□□□□□ -2.17
Knl1Q66JQ7 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.47□□□□□ -2.17
Knl1Q66JQ7 Gm24715-201ENSMUST00000102377 95 ntBASIC1.46□□□□□ -2.18
Knl1Q66JQ7 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC1.46□□□□□ -2.18
Knl1Q66JQ7 Gm17164-201ENSMUST00000169013 506 ntBASIC1.46□□□□□ -2.18
Knl1Q66JQ7 Gm20534-201ENSMUST00000172957 172 ntBASIC1.46□□□□□ -2.18
Knl1Q66JQ7 Gm28552-201ENSMUST00000190725 388 ntBASIC1.46□□□□□ -2.18
Knl1Q66JQ7 Gm44607-201ENSMUST00000205611 1090 ntBASIC1.46□□□□□ -2.18
Knl1Q66JQ7 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Knl1Q66JQ7 Gm24865-201ENSMUST00000103246 96 ntBASIC1.45□□□□□ -2.18
Knl1Q66JQ7 Gm23708-201ENSMUST00000104367 123 ntBASIC1.45□□□□□ -2.18
Knl1Q66JQ7 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC1.45□□□□□ -2.18
Knl1Q66JQ7 Gm23887-201ENSMUST00000122683 172 ntBASIC1.45□□□□□ -2.18
Knl1Q66JQ7 Gm23120-201ENSMUST00000157654 287 ntBASIC1.45□□□□□ -2.18
Knl1Q66JQ7 Gm5277-201ENSMUST00000164923 556 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms