Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm25816-201ENSMUST00000179764 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm26188-201ENSMUST00000179963 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm25471-201ENSMUST00000180126 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm26433-201ENSMUST00000180227 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm23862-201ENSMUST00000180342 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm22128-201ENSMUST00000180346 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm19641-201ENSMUST00000188432 417 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm37417-201ENSMUST00000195257 454 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.46□□□□□ -1.86
CtcfQ61164 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC3.46□□□□□ -1.86
CtcfQ61164 Gm9712-201ENSMUST00000210842 311 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm45402-201ENSMUST00000211796 223 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 AC153141.1-201ENSMUST00000218636 501 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CtcfQ61164 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CtcfQ61164 Gm22739-201ENSMUST00000083437 160 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm22365-201ENSMUST00000093750 117 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CtcfQ61164 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CtcfQ61164 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CtcfQ61164 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CtcfQ61164 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CtcfQ61164 Gm25407-201ENSMUST00000104102 134 ntBASIC3.45□□□□□ -1.86
CtcfQ61164 Gm13475-201ENSMUST00000119290 234 ntBASIC3.45□□□□□ -1.86
CtcfQ61164 Gm22479-201ENSMUST00000122566 81 ntBASIC3.45□□□□□ -1.86
CtcfQ61164 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.45□□□□□ -1.86
CtcfQ61164 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.45□□□□□ -1.86
CtcfQ61164 Gm8121-201ENSMUST00000153583 499 ntBASIC3.45□□□□□ -1.86
CtcfQ61164 Gm22225-201ENSMUST00000157358 278 ntBASIC3.45□□□□□ -1.86
CtcfQ61164 Gm23540-201ENSMUST00000157543 164 ntBASIC3.45□□□□□ -1.86
CtcfQ61164 Gm24008-201ENSMUST00000157733 138 ntBASIC3.45□□□□□ -1.86
CtcfQ61164 Gm25835-201ENSMUST00000158917 144 ntBASIC3.45□□□□□ -1.86
CtcfQ61164 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC3.45□□□□□ -1.86
CtcfQ61164 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CtcfQ61164 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.45□□□□□ -1.86
CtcfQ61164 Gm37757-201ENSMUST00000193072 210 ntBASIC3.45□□□□□ -1.86
CtcfQ61164 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.45□□□□□ -1.86
CtcfQ61164 Gm42621-201ENSMUST00000198114 275 ntBASIC3.45□□□□□ -1.86
CtcfQ61164 Gm43804-201ENSMUST00000198280 456 ntBASIC3.45□□□□□ -1.86
CtcfQ61164 Gm43083-201ENSMUST00000199594 476 ntBASIC3.45□□□□□ -1.86
CtcfQ61164 Gm19147-201ENSMUST00000199622 652 ntBASIC3.45□□□□□ -1.86
CtcfQ61164 Gm44657-201ENSMUST00000208568 450 ntBASIC3.45□□□□□ -1.86
CtcfQ61164 Gm45375-201ENSMUST00000210338 280 ntBASIC3.45□□□□□ -1.86
CtcfQ61164 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.45□□□□□ -1.86
CtcfQ61164 Gm25853-201ENSMUST00000082793 132 ntBASIC3.45□□□□□ -1.86
CtcfQ61164 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CtcfQ61164 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CtcfQ61164 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CtcfQ61164 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.45□□□□□ -1.86
CtcfQ61164 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CtcfQ61164 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CtcfQ61164 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CtcfQ61164 Gm22834-201ENSMUST00000102021 79 ntBASIC3.44□□□□□ -1.86
CtcfQ61164 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CtcfQ61164 Gm11253-201ENSMUST00000118486 201 ntBASIC3.44□□□□□ -1.86
CtcfQ61164 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.44□□□□□ -1.86
CtcfQ61164 Gm26020-201ENSMUST00000122729 183 ntBASIC3.44□□□□□ -1.86
CtcfQ61164 Gm22961-201ENSMUST00000157964 106 ntBASIC3.44□□□□□ -1.86
CtcfQ61164 Gm23068-201ENSMUST00000158239 293 ntBASIC3.44□□□□□ -1.86
CtcfQ61164 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CtcfQ61164 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CtcfQ61164 Gm27640-201ENSMUST00000184580 147 ntBASIC3.44□□□□□ -1.86
CtcfQ61164 Mir8090-201ENSMUST00000185078 136 ntBASIC3.44□□□□□ -1.86
CtcfQ61164 Gm44084-201ENSMUST00000203947 409 ntBASIC3.44□□□□□ -1.86
CtcfQ61164 Gm6012-201ENSMUST00000210821 730 ntBASIC3.44□□□□□ -1.86
CtcfQ61164 Gm45778-201ENSMUST00000211959 153 ntBASIC3.44□□□□□ -1.86
CtcfQ61164 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.44□□□□□ -1.86
CtcfQ61164 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CtcfQ61164 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CtcfQ61164 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.44□□□□□ -1.86
CtcfQ61164 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CtcfQ61164 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.43□□□□□ -1.86
CtcfQ61164 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.43□□□□□ -1.86
CtcfQ61164 Gm14647-201ENSMUST00000119392 680 ntBASIC3.43□□□□□ -1.86
CtcfQ61164 Gm14428-201ENSMUST00000120408 822 ntBASIC3.43□□□□□ -1.86
CtcfQ61164 Gm14638-201ENSMUST00000121338 216 ntBASIC3.43□□□□□ -1.86
CtcfQ61164 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.43□□□□□ -1.86
CtcfQ61164 Gm15733-201ENSMUST00000132957 242 ntBASIC3.43□□□□□ -1.86
CtcfQ61164 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.43□□□□□ -1.86
CtcfQ61164 Gm24213-201ENSMUST00000158255 258 ntBASIC3.43□□□□□ -1.86
CtcfQ61164 Mir5129-201ENSMUST00000174938 78 ntBASIC3.43□□□□□ -1.86
CtcfQ61164 Gm26061-201ENSMUST00000175584 108 ntBASIC3.43□□□□□ -1.86
CtcfQ61164 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.43□□□□□ -1.86
CtcfQ61164 Gm8532-201ENSMUST00000179174 461 ntBASIC3.43□□□□□ -1.86
CtcfQ61164 Mir6375-201ENSMUST00000197176 95 ntBASIC3.43□□□□□ -1.86
CtcfQ61164 Gm18982-201ENSMUST00000198118 529 ntBASIC3.43□□□□□ -1.86
CtcfQ61164 Gm44157-201ENSMUST00000204720 410 ntBASIC3.43□□□□□ -1.86
CtcfQ61164 Gm5023-201ENSMUST00000217442 587 ntBASIC3.43□□□□□ -1.86
CtcfQ61164 AC116589.7-201ENSMUST00000221061 239 ntBASIC3.43□□□□□ -1.86
CtcfQ61164 AC164117.1-201ENSMUST00000221726 239 ntBASIC3.43□□□□□ -1.86
CtcfQ61164 Gm19563-201ENSMUST00000222031 270 ntBASIC3.43□□□□□ -1.86
CtcfQ61164 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms