Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm3102-201ENSMUST00000164236 489 ntBASIC0.92□□□□□ -2.26
Trav3-1Q5R1I8 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Trav3-1Q5R1I8 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Trav3-1Q5R1I8 Gm27493-201ENSMUST00000184128 78 ntBASIC0.92□□□□□ -2.26
Trav3-1Q5R1I8 Gm7946-201ENSMUST00000203326 958 ntBASIC0.92□□□□□ -2.26
Trav3-1Q5R1I8 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC0.92□□□□□ -2.26
Trav3-1Q5R1I8 Gm45636-201ENSMUST00000210497 1064 ntBASIC0.92□□□□□ -2.26
Trav3-1Q5R1I8 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC0.92□□□□□ -2.26
Trav3-1Q5R1I8 AC157017.2-201ENSMUST00000218354 777 ntBASIC0.92□□□□□ -2.26
Trav3-1Q5R1I8 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Trav3-1Q5R1I8 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC0.92□□□□□ -2.26
Trav3-1Q5R1I8 Gm7648-201ENSMUST00000173036 1658 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Gm13359-201ENSMUST00000119000 695 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Gm12001-201ENSMUST00000121727 913 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 n-R5s15-201ENSMUST00000122635 111 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Gm6956-201ENSMUST00000134724 546 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Gm25283-201ENSMUST00000157272 77 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Gm24958-201ENSMUST00000158009 97 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Mir7578-201ENSMUST00000183455 82 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Mir6901-201ENSMUST00000185062 62 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Gm28404-201ENSMUST00000190242 453 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Ighv12-1-201ENSMUST00000195542 329 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Gm43199-201ENSMUST00000200019 307 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Gm44404-201ENSMUST00000203979 636 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Gm18268-201ENSMUST00000208445 943 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Gm6796-201ENSMUST00000211919 243 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 AC174797.4-201ENSMUST00000225510 347 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 AC165106.2-201ENSMUST00000226749 97 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Gm23939-201ENSMUST00000082880 133 ntBASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Trav3-1Q5R1I8 Gm38255-201ENSMUST00000194910 2996 ntBASIC0.9□□□□□ -2.26
Trav3-1Q5R1I8 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC0.9□□□□□ -2.26
Trav3-1Q5R1I8 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 AC153964.2-201ENSMUST00000217704 2474 ntBASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Gm12636-201ENSMUST00000117395 624 ntBASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Gm13672-201ENSMUST00000117554 459 ntBASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Gm15115-201ENSMUST00000121145 264 ntBASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Gm8121-201ENSMUST00000153583 499 ntBASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Gm24056-201ENSMUST00000158617 146 ntBASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Traj60-201ENSMUST00000167781 54 ntBASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Gm29231-201ENSMUST00000179850 319 ntBASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Gm18645-201ENSMUST00000209593 651 ntBASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 AC125464.1-201ENSMUST00000228013 512 ntBASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Gm25810-201ENSMUST00000082752 108 ntBASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Mir134-201ENSMUST00000083492 71 ntBASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Mir127-201ENSMUST00000093568 70 ntBASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Gm22444-201ENSMUST00000093693 108 ntBASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Gm42639-201ENSMUST00000197061 1871 ntBASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Gm36989-201ENSMUST00000193225 2160 ntBASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Gm42801-201ENSMUST00000202562 2865 ntBASIC0.9□□□□□ -2.27
Trav3-1Q5R1I8 Gm44114-201ENSMUST00000203270 2727 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Mdga2-203ENSMUST00000113942 423 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm14677-201ENSMUST00000117866 486 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm14566-201ENSMUST00000118915 321 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm14785-201ENSMUST00000120185 539 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm14656-201ENSMUST00000120342 502 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm22726-201ENSMUST00000158089 179 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm24922-201ENSMUST00000158511 102 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm24333-201ENSMUST00000175101 84 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm29397-201ENSMUST00000185205 333 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm5329-201ENSMUST00000186898 463 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm28437-201ENSMUST00000190277 783 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm37353-201ENSMUST00000194497 313 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm43217-201ENSMUST00000199513 367 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm42807-201ENSMUST00000200141 329 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm44024-201ENSMUST00000203008 476 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm2676-201ENSMUST00000207279 606 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 AC109172.1-201ENSMUST00000227503 187 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Gm24948-201ENSMUST00000082866 207 ntBASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Trav3-1Q5R1I8 AC133934.2-201ENSMUST00000221729 4129 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms