Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.55□□□□□ -2.16
Trav5d-4Q5R1F6 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Gm13343-201ENSMUST00000116474 105 ntBASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Gm15215-201ENSMUST00000117773 489 ntBASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Gm12935-201ENSMUST00000119352 246 ntBASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Gm3788-201ENSMUST00000119949 136 ntBASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Gm16359-201ENSMUST00000124511 289 ntBASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Gm27511-201ENSMUST00000183502 127 ntBASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Gm42672-201ENSMUST00000197821 352 ntBASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Gm43171-201ENSMUST00000199882 291 ntBASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Gm7039-201ENSMUST00000205138 346 ntBASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Gm44881-201ENSMUST00000205425 367 ntBASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 AC069561.3-201ENSMUST00000217321 114 ntBASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 CT010455.1-201ENSMUST00000218579 413 ntBASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Gm24151-201ENSMUST00000082758 141 ntBASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Gm22740-201ENSMUST00000083439 109 ntBASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trav5d-4Q5R1F6 Gm25485-201ENSMUST00000104120 132 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Mir669d-201ENSMUST00000104644 121 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm15760-201ENSMUST00000119553 283 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm14945-201ENSMUST00000119556 1118 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm15193-201ENSMUST00000120224 865 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm11430-201ENSMUST00000121317 217 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm11575-201ENSMUST00000122243 228 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm24716-201ENSMUST00000157524 104 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm22666-201ENSMUST00000158717 164 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm2930-201ENSMUST00000170403 474 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Mir6995-201ENSMUST00000183658 71 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Mir6997-201ENSMUST00000184313 71 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Mir7678-201ENSMUST00000185076 71 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm28163-201ENSMUST00000187099 325 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm37989-201ENSMUST00000195202 803 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm8041-201ENSMUST00000199755 616 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm44088-201ENSMUST00000204595 237 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm45386-201ENSMUST00000210194 218 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 CT030184.1-201ENSMUST00000222393 416 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 CT571256.1-201ENSMUST00000226045 585 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Gm24165-201ENSMUST00000082718 128 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Mir300-201ENSMUST00000083485 79 ntBASIC1.53□□□□□ -2.16
Trav5d-4Q5R1F6 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.53□□□□□ -2.17
Trav5d-4Q5R1F6 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Gm13602-201ENSMUST00000122405 493 ntBASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Gm25624-201ENSMUST00000157222 275 ntBASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Gm26365-201ENSMUST00000179177 94 ntBASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Gm37778-201ENSMUST00000191732 190 ntBASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Gm43007-201ENSMUST00000197618 291 ntBASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Gm18453-201ENSMUST00000208000 626 ntBASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Gm45252-201ENSMUST00000211579 397 ntBASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Gm7065-201ENSMUST00000222150 474 ntBASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Trav5d-4Q5R1F6 AC122887.2-201ENSMUST00000219465 1603 ntBASIC1.51□□□□□ -2.17
Trav5d-4Q5R1F6 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.51□□□□□ -2.17
Trav5d-4Q5R1F6 Gm18300-201ENSMUST00000192792 1406 ntBASIC1.51□□□□□ -2.17
Trav5d-4Q5R1F6 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.51□□□□□ -2.17
Trav5d-4Q5R1F6 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC1.51□□□□□ -2.17
Trav5d-4Q5R1F6 Gm13087-201ENSMUST00000118298 256 ntBASIC1.51□□□□□ -2.17
Trav5d-4Q5R1F6 Gm7429-201ENSMUST00000118664 348 ntBASIC1.51□□□□□ -2.17
Trav5d-4Q5R1F6 Gm25113-201ENSMUST00000157185 143 ntBASIC1.51□□□□□ -2.17
Trav5d-4Q5R1F6 Gm22535-201ENSMUST00000158174 119 ntBASIC1.51□□□□□ -2.17
Trav5d-4Q5R1F6 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.51□□□□□ -2.17
Trav5d-4Q5R1F6 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Trav5d-4Q5R1F6 Gm24572-201ENSMUST00000175505 88 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms