Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm25339-201ENSMUST00000157458 232 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm22665-201ENSMUST00000158720 275 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm17061-201ENSMUST00000163167 499 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm17538-201ENSMUST00000168236 327 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm20648-201ENSMUST00000175815 328 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm7909-201ENSMUST00000182688 614 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm28439-201ENSMUST00000187714 876 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm37993-201ENSMUST00000195301 988 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm44727-201ENSMUST00000204225 451 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm44554-201ENSMUST00000208738 147 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm45273-201ENSMUST00000211559 281 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Mir423-201ENSMUST00000083584 109 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm24280-201ENSMUST00000104237 134 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Gm14566-201ENSMUST00000118915 321 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Gm27921-201ENSMUST00000183968 108 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Gm42796-201ENSMUST00000199913 1087 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Gm44520-201ENSMUST00000205447 802 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Gm45912-201ENSMUST00000210646 543 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 AC127302.1-201ENSMUST00000215973 1111 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 CT010455.1-201ENSMUST00000218579 413 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 AC154506.1-201ENSMUST00000225178 621 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 AC158395.1-201ENSMUST00000227206 452 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Mir200b-201ENSMUST00000083615 70 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 AC115047.2-201ENSMUST00000214421 1848 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Gm15279-201ENSMUST00000155593 288 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Gm22225-201ENSMUST00000157358 278 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Gm23387-201ENSMUST00000158586 107 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Gm29288-201ENSMUST00000191582 901 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Gm43224-201ENSMUST00000201567 898 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Gm44634-201ENSMUST00000206119 152 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Gm46993-201ENSMUST00000220708 259 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 CT025157.1-201ENSMUST00000226241 292 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.7□□□□□ -2.14
Col27a1Q5QNQ9 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Gm24340-201ENSMUST00000104208 97 ntBASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Gm25526-201ENSMUST00000104332 132 ntBASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Gm14599-201ENSMUST00000120469 474 ntBASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Gm15177-201ENSMUST00000120491 577 ntBASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Gm12155-201ENSMUST00000121267 160 ntBASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Gm22339-201ENSMUST00000157718 62 ntBASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Gm22516-201ENSMUST00000158266 124 ntBASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Gm20534-201ENSMUST00000172957 172 ntBASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Gm27979-201ENSMUST00000185126 56 ntBASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Gm18252-203ENSMUST00000215855 757 ntBASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 AC122194.1-201ENSMUST00000220549 293 ntBASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 AC120540.1-201ENSMUST00000221879 324 ntBASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Gm23104-201ENSMUST00000083722 104 ntBASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Gm23850-201ENSMUST00000083830 169 ntBASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.69□□□□□ -2.14
Col27a1Q5QNQ9 Gm25313-201ENSMUST00000101817 116 ntBASIC1.68□□□□□ -2.14
Col27a1Q5QNQ9 Gm15090-201ENSMUST00000118787 1196 ntBASIC1.68□□□□□ -2.14
Col27a1Q5QNQ9 Gm12926-201ENSMUST00000121158 409 ntBASIC1.68□□□□□ -2.14
Col27a1Q5QNQ9 Gm15089-201ENSMUST00000122332 1196 ntBASIC1.68□□□□□ -2.14
Col27a1Q5QNQ9 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Col27a1Q5QNQ9 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Col27a1Q5QNQ9 Gm22561-201ENSMUST00000157331 84 ntBASIC1.68□□□□□ -2.14
Col27a1Q5QNQ9 Gm24086-201ENSMUST00000175171 98 ntBASIC1.68□□□□□ -2.14
Col27a1Q5QNQ9 Gm23287-201ENSMUST00000179427 116 ntBASIC1.68□□□□□ -2.14
Col27a1Q5QNQ9 Gm23143-201ENSMUST00000180137 116 ntBASIC1.68□□□□□ -2.14
Col27a1Q5QNQ9 Mir6338-201ENSMUST00000183389 109 ntBASIC1.68□□□□□ -2.14
Col27a1Q5QNQ9 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.68□□□□□ -2.14
Col27a1Q5QNQ9 Gm42960-201ENSMUST00000202160 241 ntBASIC1.68□□□□□ -2.14
Col27a1Q5QNQ9 AC152979.4-201ENSMUST00000219893 379 ntBASIC1.68□□□□□ -2.14
Col27a1Q5QNQ9 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.68□□□□□ -2.14
Col27a1Q5QNQ9 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms