Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm5258-201ENSMUST00000165437 327 ntBASIC7.69□□□□□ -1.18
Trim41Q5NCC3 Gm28267-201ENSMUST00000191093 265 ntBASIC7.69□□□□□ -1.18
Trim41Q5NCC3 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC7.69□□□□□ -1.18
Trim41Q5NCC3 Gm43978-201ENSMUST00000203491 451 ntBASIC7.69□□□□□ -1.18
Trim41Q5NCC3 Gm24147-201ENSMUST00000082763 144 ntBASIC7.69□□□□□ -1.18
Trim41Q5NCC3 Gm25698-201ENSMUST00000082897 107 ntBASIC7.69□□□□□ -1.18
Trim41Q5NCC3 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Trim41Q5NCC3 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Trim41Q5NCC3 Gm42482-201ENSMUST00000198904 1947 ntBASIC7.69□□□□□ -1.18
Trim41Q5NCC3 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Trim41Q5NCC3 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
Trim41Q5NCC3 Gm44433-201ENSMUST00000203540 4832 ntBASIC7.69□□□□□ -1.18
Trim41Q5NCC3 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trim41Q5NCC3 Gm37397-201ENSMUST00000194579 2842 ntBASIC7.69□□□□□ -1.18
Trim41Q5NCC3 Gm21940-201ENSMUST00000204940 2278 ntBASIC7.68□□□□□ -1.18
Trim41Q5NCC3 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim41Q5NCC3 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim41Q5NCC3 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim41Q5NCC3 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim41Q5NCC3 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim41Q5NCC3 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trim41Q5NCC3 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim41Q5NCC3 Gm22496-201ENSMUST00000104493 88 ntBASIC7.68□□□□□ -1.18
Trim41Q5NCC3 Snora64-201ENSMUST00000104521 134 ntBASIC7.68□□□□□ -1.18
Trim41Q5NCC3 Gm12617-201ENSMUST00000121268 381 ntBASIC7.68□□□□□ -1.18
Trim41Q5NCC3 Gm24627-201ENSMUST00000122764 138 ntBASIC7.68□□□□□ -1.18
Trim41Q5NCC3 AC159231.1-201ENSMUST00000225365 226 ntBASIC7.68□□□□□ -1.18
Trim41Q5NCC3 AC160756.1-201ENSMUST00000227266 235 ntBASIC7.68□□□□□ -1.18
Trim41Q5NCC3 Mir128-1-201ENSMUST00000083586 70 ntBASIC7.68□□□□□ -1.18
Trim41Q5NCC3 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim41Q5NCC3 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim41Q5NCC3 Gm3972-201ENSMUST00000173960 2861 ntBASIC7.68□□□□□ -1.18
Trim41Q5NCC3 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim41Q5NCC3 Gm44027-201ENSMUST00000203419 3480 ntBASIC7.68□□□□□ -1.18
Trim41Q5NCC3 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Gm25407-201ENSMUST00000104102 134 ntBASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Gm12412-201ENSMUST00000121867 328 ntBASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Gm23184-201ENSMUST00000122594 131 ntBASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Gm23644-201ENSMUST00000157856 77 ntBASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Mir1966-201ENSMUST00000158807 108 ntBASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Gm26195-201ENSMUST00000175035 101 ntBASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Mir6335-201ENSMUST00000184081 98 ntBASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Gm29428-201ENSMUST00000190086 409 ntBASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Gm29218-205ENSMUST00000190846 615 ntBASIC7.67□□□□□ -1.18
Trim41Q5NCC3 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Gm45884-201ENSMUST00000209540 3416 ntBASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Trim41Q5NCC3 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Gm37011-201ENSMUST00000195543 2935 ntBASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Gm5248-201ENSMUST00000186108 4046 ntBASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Gm37053-201ENSMUST00000192399 2087 ntBASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Gm37696-201ENSMUST00000194223 3349 ntBASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Gm21999-201ENSMUST00000165985 387 ntBASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Gm44092-201ENSMUST00000204470 258 ntBASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Gm9174-201ENSMUST00000078149 255 ntBASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Gm38212-201ENSMUST00000194081 2756 ntBASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Gm32444-201ENSMUST00000195147 3511 ntBASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Trim41Q5NCC3 AC131743.1-201ENSMUST00000222138 4024 ntBASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Gm42583-201ENSMUST00000202678 6700 ntBASIC7.66□□□□□ -1.18
Trim41Q5NCC3 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC7.65□□□□□ -1.18
Trim41Q5NCC3 Gm25104-201ENSMUST00000122476 163 ntBASIC7.65□□□□□ -1.18
Trim41Q5NCC3 Hba-ps4-201ENSMUST00000128900 447 ntBASIC7.65□□□□□ -1.18
Trim41Q5NCC3 Gm24402-201ENSMUST00000157873 91 ntBASIC7.65□□□□□ -1.18
Trim41Q5NCC3 Gm26354-201ENSMUST00000158221 129 ntBASIC7.65□□□□□ -1.18
Trim41Q5NCC3 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC7.65□□□□□ -1.18
Trim41Q5NCC3 Gm37050-201ENSMUST00000193464 466 ntBASIC7.65□□□□□ -1.18
Trim41Q5NCC3 Gm37006-201ENSMUST00000195253 2674 ntBASIC7.65□□□□□ -1.18
Trim41Q5NCC3 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim41Q5NCC3 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Trim41Q5NCC3 Gm43746-201ENSMUST00000200028 317 ntBASIC7.65□□□□□ -1.18
Trim41Q5NCC3 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
Trim41Q5NCC3 Gm17779-201ENSMUST00000213395 394 ntBASIC7.65□□□□□ -1.18
Trim41Q5NCC3 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim41Q5NCC3 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Trim41Q5NCC3 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC7.65□□□□□ -1.19
Trim41Q5NCC3 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Trim41Q5NCC3 Gm8989-201ENSMUST00000184782 7275 ntBASIC7.64□□□□□ -1.19
Trim41Q5NCC3 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim41Q5NCC3 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim41Q5NCC3 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Trim41Q5NCC3 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC7.64□□□□□ -1.19
Trim41Q5NCC3 Gm24839-201ENSMUST00000122602 107 ntBASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms