Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Mir193a-201ENSMUST00000083461 66 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.42□□□□□ -2.02
Usp28Q5I043 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.42□□□□□ -2.02
Usp28Q5I043 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm23175-201ENSMUST00000104371 132 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm14657-201ENSMUST00000117461 302 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm5937-201ENSMUST00000119715 643 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm23885-201ENSMUST00000122682 294 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm25283-201ENSMUST00000157272 77 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm23352-201ENSMUST00000158428 64 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm16289-201ENSMUST00000162079 183 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm17162-201ENSMUST00000168538 473 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC2.41□□□□□ -2.02
Usp28Q5I043 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm28163-201ENSMUST00000187099 325 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm28650-201ENSMUST00000188413 411 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm36966-201ENSMUST00000192217 413 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC2.41□□□□□ -2.02
Usp28Q5I043 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Usp28Q5I043 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm44295-201ENSMUST00000203805 437 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm44520-201ENSMUST00000205447 802 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm45878-201ENSMUST00000211839 241 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm18703-201ENSMUST00000215318 333 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm20304-201ENSMUST00000218168 444 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm46193-201ENSMUST00000219399 364 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm17890-201ENSMUST00000221419 757 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.41□□□□□ -2.02
Usp28Q5I043 CT025538.2-201ENSMUST00000226083 772 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Usp28Q5I043 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm23645-201ENSMUST00000083228 108 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm23096-201ENSMUST00000083447 107 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Usp28Q5I043 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.41□□□□□ -2.02
Usp28Q5I043 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Usp28Q5I043 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Usp28Q5I043 Gm14069-201ENSMUST00000120815 229 ntBASIC2.4□□□□□ -2.03
Usp28Q5I043 Gm13356-201ENSMUST00000121678 335 ntBASIC2.4□□□□□ -2.03
Usp28Q5I043 Gm13406-201ENSMUST00000121991 256 ntBASIC2.4□□□□□ -2.03
Usp28Q5I043 Gm25637-201ENSMUST00000157529 107 ntBASIC2.4□□□□□ -2.03
Usp28Q5I043 Gm7858-201ENSMUST00000190177 622 ntBASIC2.4□□□□□ -2.03
Usp28Q5I043 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.4□□□□□ -2.03
Usp28Q5I043 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.4□□□□□ -2.03
Usp28Q5I043 Gm44391-201ENSMUST00000198490 93 ntBASIC2.4□□□□□ -2.03
Usp28Q5I043 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.4□□□□□ -2.03
Usp28Q5I043 AC153541.1-201ENSMUST00000213786 294 ntBASIC2.4□□□□□ -2.03
Usp28Q5I043 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.4□□□□□ -2.03
Usp28Q5I043 Gm25856-201ENSMUST00000082786 75 ntBASIC2.4□□□□□ -2.03
Usp28Q5I043 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.4□□□□□ -2.03
Usp28Q5I043 Gm43924-201ENSMUST00000204851 1736 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
Usp28Q5I043 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.39□□□□□ -2.03
Usp28Q5I043 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
Usp28Q5I043 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Usp28Q5I043 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Usp28Q5I043 Gm15844-201ENSMUST00000118016 576 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Gm14793-201ENSMUST00000118739 311 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Gm14736-201ENSMUST00000121470 336 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Gm14848-201ENSMUST00000121850 467 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Gm12238-201ENSMUST00000127764 124 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Gm25391-201ENSMUST00000157342 134 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Gm24532-201ENSMUST00000157951 286 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Gm25863-201ENSMUST00000158249 329 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Usp28Q5I043 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Gm22716-201ENSMUST00000177596 107 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Usp28Q5I043 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.39□□□□□ -2.03
Usp28Q5I043 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Usp28Q5I043 Gm29192-201ENSMUST00000190942 377 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Gm18551-201ENSMUST00000195594 642 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Gm44476-201ENSMUST00000196225 91 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Gm18982-201ENSMUST00000198118 529 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Gm44657-201ENSMUST00000208568 450 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Gm26055-201ENSMUST00000083038 107 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Gm5670-201ENSMUST00000093546 372 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Usp28Q5I043 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.39□□□□□ -2.03
Usp28Q5I043 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms