Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC1.63□□□□□ -2.15
Ccdc88bQ4QRL3 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC1.63□□□□□ -2.15
Ccdc88bQ4QRL3 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.63□□□□□ -2.15
Ccdc88bQ4QRL3 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.63□□□□□ -2.15
Ccdc88bQ4QRL3 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC1.63□□□□□ -2.15
Ccdc88bQ4QRL3 CT030166.3-201ENSMUST00000223203 193 ntBASIC1.63□□□□□ -2.15
Ccdc88bQ4QRL3 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
Ccdc88bQ4QRL3 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
Ccdc88bQ4QRL3 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Ccdc88bQ4QRL3 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
Ccdc88bQ4QRL3 Gm15067-201ENSMUST00000119534 156 ntBASIC1.62□□□□□ -2.15
Ccdc88bQ4QRL3 Gm23718-201ENSMUST00000157350 307 ntBASIC1.62□□□□□ -2.15
Ccdc88bQ4QRL3 Gm9613-201ENSMUST00000171662 196 ntBASIC1.62□□□□□ -2.15
Ccdc88bQ4QRL3 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Ccdc88bQ4QRL3 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.61□□□□□ -2.15
Ccdc88bQ4QRL3 Gm29192-201ENSMUST00000190942 377 ntBASIC1.61□□□□□ -2.15
Ccdc88bQ4QRL3 Gm37817-201ENSMUST00000195276 434 ntBASIC1.61□□□□□ -2.15
Ccdc88bQ4QRL3 Gm45367-201ENSMUST00000210171 347 ntBASIC1.61□□□□□ -2.15
Ccdc88bQ4QRL3 Gm7869-201ENSMUST00000121457 1322 ntBASIC1.61□□□□□ -2.15
Ccdc88bQ4QRL3 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Ccdc88bQ4QRL3 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Ccdc88bQ4QRL3 Gm24772-201ENSMUST00000158507 110 ntBASIC1.6□□□□□ -2.15
Ccdc88bQ4QRL3 Gm25994-201ENSMUST00000175392 101 ntBASIC1.6□□□□□ -2.15
Ccdc88bQ4QRL3 Mir6383-201ENSMUST00000184545 116 ntBASIC1.6□□□□□ -2.15
Ccdc88bQ4QRL3 Gm3724-201ENSMUST00000197957 349 ntBASIC1.6□□□□□ -2.15
Ccdc88bQ4QRL3 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC1.6□□□□□ -2.15
Ccdc88bQ4QRL3 Gm22658-201ENSMUST00000104196 155 ntBASIC1.59□□□□□ -2.15
Ccdc88bQ4QRL3 Mir873a-201ENSMUST00000104863 77 ntBASIC1.59□□□□□ -2.15
Ccdc88bQ4QRL3 Gm11490-201ENSMUST00000118128 272 ntBASIC1.59□□□□□ -2.15
Ccdc88bQ4QRL3 Mir5136-201ENSMUST00000175573 76 ntBASIC1.59□□□□□ -2.15
Ccdc88bQ4QRL3 Gm8041-201ENSMUST00000199755 616 ntBASIC1.59□□□□□ -2.15
Ccdc88bQ4QRL3 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.59□□□□□ -2.15
Ccdc88bQ4QRL3 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Ccdc88bQ4QRL3 Gm24920-201ENSMUST00000083018 85 ntBASIC1.59□□□□□ -2.15
Ccdc88bQ4QRL3 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Ccdc88bQ4QRL3 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Ccdc88bQ4QRL3 Gm14355-201ENSMUST00000117352 264 ntBASIC1.58□□□□□ -2.16
Ccdc88bQ4QRL3 Mir6380-201ENSMUST00000184334 81 ntBASIC1.58□□□□□ -2.16
Ccdc88bQ4QRL3 Gm44446-201ENSMUST00000204864 255 ntBASIC1.58□□□□□ -2.16
Ccdc88bQ4QRL3 Gm45791-201ENSMUST00000212908 352 ntBASIC1.58□□□□□ -2.16
Ccdc88bQ4QRL3 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Ccdc88bQ4QRL3 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Ccdc88bQ4QRL3 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Ccdc88bQ4QRL3 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.58□□□□□ -2.16
Ccdc88bQ4QRL3 Gm25541-201ENSMUST00000116888 126 ntBASIC1.57□□□□□ -2.16
Ccdc88bQ4QRL3 Gm11854-201ENSMUST00000117839 446 ntBASIC1.57□□□□□ -2.16
Ccdc88bQ4QRL3 Gm11786-201ENSMUST00000120799 155 ntBASIC1.57□□□□□ -2.16
Ccdc88bQ4QRL3 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC1.57□□□□□ -2.16
Ccdc88bQ4QRL3 Gm22037-201ENSMUST00000157280 296 ntBASIC1.57□□□□□ -2.16
Ccdc88bQ4QRL3 Gm25220-201ENSMUST00000157546 95 ntBASIC1.57□□□□□ -2.16
Ccdc88bQ4QRL3 Gm23278-201ENSMUST00000157911 143 ntBASIC1.57□□□□□ -2.16
Ccdc88bQ4QRL3 Gm22516-201ENSMUST00000158266 124 ntBASIC1.57□□□□□ -2.16
Ccdc88bQ4QRL3 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.57□□□□□ -2.16
Ccdc88bQ4QRL3 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Ccdc88bQ4QRL3 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
Ccdc88bQ4QRL3 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
Ccdc88bQ4QRL3 Gm15659-201ENSMUST00000118881 341 ntBASIC1.56□□□□□ -2.16
Ccdc88bQ4QRL3 Gm13440-201ENSMUST00000121665 496 ntBASIC1.56□□□□□ -2.16
Ccdc88bQ4QRL3 Gm24381-201ENSMUST00000122697 104 ntBASIC1.56□□□□□ -2.16
Ccdc88bQ4QRL3 Gm22390-201ENSMUST00000157588 325 ntBASIC1.56□□□□□ -2.16
Ccdc88bQ4QRL3 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Ccdc88bQ4QRL3 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.56□□□□□ -2.16
Ccdc88bQ4QRL3 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
Ccdc88bQ4QRL3 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Ccdc88bQ4QRL3 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Ccdc88bQ4QRL3 Gm27511-201ENSMUST00000183502 127 ntBASIC1.56□□□□□ -2.16
Ccdc88bQ4QRL3 Crs-ps-201ENSMUST00000203723 760 ntBASIC1.56□□□□□ -2.16
Ccdc88bQ4QRL3 Gm45273-201ENSMUST00000211559 281 ntBASIC1.56□□□□□ -2.16
Ccdc88bQ4QRL3 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Ccdc88bQ4QRL3 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC1.55□□□□□ -2.16
Ccdc88bQ4QRL3 Gm24323-201ENSMUST00000175342 77 ntBASIC1.55□□□□□ -2.16
Ccdc88bQ4QRL3 Gm27636-201ENSMUST00000184528 122 ntBASIC1.55□□□□□ -2.16
Ccdc88bQ4QRL3 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Ccdc88bQ4QRL3 Gm18338-201ENSMUST00000222381 560 ntBASIC1.55□□□□□ -2.16
Ccdc88bQ4QRL3 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC1.55□□□□□ -2.16
Ccdc88bQ4QRL3 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Ccdc88bQ4QRL3 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Ccdc88bQ4QRL3 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.54□□□□□ -2.16
Ccdc88bQ4QRL3 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.54□□□□□ -2.16
Ccdc88bQ4QRL3 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.54□□□□□ -2.16
Ccdc88bQ4QRL3 Gm25730-201ENSMUST00000178753 165 ntBASIC1.54□□□□□ -2.16
Ccdc88bQ4QRL3 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC1.54□□□□□ -2.16
Ccdc88bQ4QRL3 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.54□□□□□ -2.16
Ccdc88bQ4QRL3 Ear14-201ENSMUST00000049559 468 ntBASIC1.54□□□□□ -2.16
Ccdc88bQ4QRL3 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Ccdc88bQ4QRL3 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Ccdc88bQ4QRL3 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Ccdc88bQ4QRL3 Gm9830-201ENSMUST00000178509 357 ntBASIC1.53□□□□□ -2.16
Ccdc88bQ4QRL3 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Ccdc88bQ4QRL3 Gm6060-201ENSMUST00000188671 251 ntBASIC1.53□□□□□ -2.16
Ccdc88bQ4QRL3 Gm38217-201ENSMUST00000194358 910 ntBASIC1.53□□□□□ -2.16
Ccdc88bQ4QRL3 Gm45375-201ENSMUST00000210338 280 ntBASIC1.53□□□□□ -2.16
Ccdc88bQ4QRL3 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC1.53□□□□□ -2.16
Ccdc88bQ4QRL3 AC163664.1-201ENSMUST00000226251 1248 ntBASIC1.53□□□□□ -2.16
Ccdc88bQ4QRL3 AC131100.2-201ENSMUST00000227701 998 ntBASIC1.53□□□□□ -2.16
Ccdc88bQ4QRL3 Gm26063-201ENSMUST00000083378 107 ntBASIC1.53□□□□□ -2.16
Ccdc88bQ4QRL3 Mir141-201ENSMUST00000083540 72 ntBASIC1.53□□□□□ -2.16
Ccdc88bQ4QRL3 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Ccdc88bQ4QRL3 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.52□□□□□ -2.17
Ccdc88bQ4QRL3 Gm14899-201ENSMUST00000118673 548 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms