Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm24153-201ENSMUST00000179280 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm25597-201ENSMUST00000179388 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm25816-201ENSMUST00000179764 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm26188-201ENSMUST00000179963 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm26433-201ENSMUST00000180227 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm23190-201ENSMUST00000180307 64 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm22128-201ENSMUST00000180346 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm27313-201ENSMUST00000183500 142 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm27869-201ENSMUST00000184327 122 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm28755-201ENSMUST00000185773 199 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm7329-201ENSMUST00000185915 210 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm8125-201ENSMUST00000216602 738 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Trim40Q3UWA4 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.62□□□□□ -1.99
Trim40Q3UWA4 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm26129-201ENSMUST00000082719 107 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Gm14797-201ENSMUST00000119378 1480 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Gm25764-201ENSMUST00000104092 134 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Gm14579-201ENSMUST00000117068 283 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Gm12697-201ENSMUST00000118008 667 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Gm14918-201ENSMUST00000118153 268 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Gm13510-201ENSMUST00000118659 429 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Gm14940-201ENSMUST00000119309 495 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Gm11522-201ENSMUST00000120533 176 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Gm15223-201ENSMUST00000120989 826 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Gm23429-201ENSMUST00000122486 149 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Gm16533-201ENSMUST00000140035 228 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Gm23380-201ENSMUST00000158448 103 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Gm27245-201ENSMUST00000184385 376 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Gm9762-201ENSMUST00000036976 444 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Gm25592-201ENSMUST00000082635 131 ntBASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trim40Q3UWA4 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm24118-201ENSMUST00000103972 126 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm22496-201ENSMUST00000104493 88 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm12191-201ENSMUST00000118307 348 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm12806-201ENSMUST00000119384 268 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm12458-201ENSMUST00000119387 495 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm9703-201ENSMUST00000119573 343 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm15807-201ENSMUST00000119880 1128 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm16428-201ENSMUST00000121193 723 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm23599-201ENSMUST00000157261 251 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm24959-201ENSMUST00000157924 146 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm25175-201ENSMUST00000178712 79 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm24518-201ENSMUST00000180275 94 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm28399-201ENSMUST00000186221 318 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm28572-201ENSMUST00000187444 318 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm37658-201ENSMUST00000192672 315 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm9236-201ENSMUST00000196892 587 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm43708-201ENSMUST00000198857 961 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm44060-201ENSMUST00000204440 410 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trim40Q3UWA4 AC153141.1-201ENSMUST00000218636 501 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.6□□□□□ -1.99
Trim40Q3UWA4 AC154788.1-201ENSMUST00000225003 340 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm4945-201ENSMUST00000075152 453 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm23264-201ENSMUST00000083372 107 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms