Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm23128-202ENSMUST00000196578 133 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm17906-201ENSMUST00000202480 901 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm44128-201ENSMUST00000204909 219 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm44818-201ENSMUST00000206608 358 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm6012-201ENSMUST00000210821 730 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm7422-201ENSMUST00000220115 640 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm23848-201ENSMUST00000083826 106 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm26108-201ENSMUST00000083973 191 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trafd1Q3UDK1 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trafd1Q3UDK1 Mir878-201ENSMUST00000104680 78 ntBASIC2.55□□□□□ -2
Trafd1Q3UDK1 Mir466f-2-201ENSMUST00000104805 94 ntBASIC2.55□□□□□ -2
Trafd1Q3UDK1 Gm14657-201ENSMUST00000117461 302 ntBASIC2.55□□□□□ -2
Trafd1Q3UDK1 Gm11845-201ENSMUST00000117886 327 ntBASIC2.55□□□□□ -2
Trafd1Q3UDK1 Gm9225-201ENSMUST00000121921 836 ntBASIC2.55□□□□□ -2
Trafd1Q3UDK1 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.55□□□□□ -2
Trafd1Q3UDK1 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.55□□□□□ -2
Trafd1Q3UDK1 Gm25559-201ENSMUST00000157182 74 ntBASIC2.55□□□□□ -2
Trafd1Q3UDK1 Gm23124-201ENSMUST00000157650 107 ntBASIC2.55□□□□□ -2
Trafd1Q3UDK1 Gm24922-201ENSMUST00000158511 102 ntBASIC2.55□□□□□ -2
Trafd1Q3UDK1 Gm26652-202ENSMUST00000181672 475 ntBASIC2.55□□□□□ -2
Trafd1Q3UDK1 Gm37568-201ENSMUST00000191755 364 ntBASIC2.55□□□□□ -2
Trafd1Q3UDK1 Gm45438-201ENSMUST00000210242 564 ntBASIC2.55□□□□□ -2
Trafd1Q3UDK1 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.55□□□□□ -2
Trafd1Q3UDK1 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trafd1Q3UDK1 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.55□□□□□ -2
Trafd1Q3UDK1 CT010480.5-201ENSMUST00000225026 217 ntBASIC2.55□□□□□ -2
Trafd1Q3UDK1 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trafd1Q3UDK1 Gm26055-201ENSMUST00000083038 107 ntBASIC2.55□□□□□ -2
Trafd1Q3UDK1 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC2.55□□□□□ -2
Trafd1Q3UDK1 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Trafd1Q3UDK1 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trafd1Q3UDK1 Mir466k-201ENSMUST00000116774 122 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm12370-201ENSMUST00000117809 604 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm14868-201ENSMUST00000117840 216 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm2066-201ENSMUST00000118046 389 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm12368-201ENSMUST00000122251 434 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm22563-201ENSMUST00000157333 269 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm24780-201ENSMUST00000157635 143 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm23078-201ENSMUST00000157848 148 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm24532-201ENSMUST00000157951 286 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm17538-201ENSMUST00000168236 327 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm20534-201ENSMUST00000172957 172 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Mir3076-201ENSMUST00000175415 60 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm22290-201ENSMUST00000177655 107 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm22583-201ENSMUST00000178031 107 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm27379-201ENSMUST00000183730 123 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm29658-201ENSMUST00000185404 230 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm28299-201ENSMUST00000189908 339 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.54□□□□□ -2
Trafd1Q3UDK1 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Trafd1Q3UDK1 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm44391-201ENSMUST00000198490 93 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm42818-201ENSMUST00000198869 987 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm43487-201ENSMUST00000200331 1031 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm44923-201ENSMUST00000206673 85 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.54□□□□□ -2
Trafd1Q3UDK1 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.54□□□□□ -2
Trafd1Q3UDK1 AC164297.5-201ENSMUST00000224365 198 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 AC123656.2-201ENSMUST00000226726 227 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trafd1Q3UDK1 Gm24268-201ENSMUST00000082990 110 ntBASIC2.54□□□□□ -2
Trafd1Q3UDK1 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Trafd1Q3UDK1 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trafd1Q3UDK1 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trafd1Q3UDK1 Gm8217-201ENSMUST00000119136 465 ntBASIC2.53□□□□□ -2
Trafd1Q3UDK1 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.53□□□□□ -2
Trafd1Q3UDK1 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC2.53□□□□□ -2
Trafd1Q3UDK1 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trafd1Q3UDK1 Gm25153-201ENSMUST00000157118 156 ntBASIC2.53□□□□□ -2
Trafd1Q3UDK1 Gm25283-201ENSMUST00000157272 77 ntBASIC2.53□□□□□ -2
Trafd1Q3UDK1 Gm22839-201ENSMUST00000158436 304 ntBASIC2.53□□□□□ -2
Trafd1Q3UDK1 Gm17162-201ENSMUST00000168538 473 ntBASIC2.53□□□□□ -2
Trafd1Q3UDK1 Gm20660-201ENSMUST00000177515 289 ntBASIC2.53□□□□□ -2
Trafd1Q3UDK1 Gm24464-201ENSMUST00000179697 107 ntBASIC2.53□□□□□ -2
Trafd1Q3UDK1 Gm10193-201ENSMUST00000188288 231 ntBASIC2.53□□□□□ -2
Trafd1Q3UDK1 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC2.53□□□□□ -2
Trafd1Q3UDK1 Gm29330-201ENSMUST00000190032 699 ntBASIC2.53□□□□□ -2
Trafd1Q3UDK1 Gm28098-201ENSMUST00000191361 699 ntBASIC2.53□□□□□ -2
Trafd1Q3UDK1 Gm43804-201ENSMUST00000198280 456 ntBASIC2.53□□□□□ -2
Trafd1Q3UDK1 Gm45452-201ENSMUST00000210905 177 ntBASIC2.53□□□□□ -2
Trafd1Q3UDK1 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.53□□□□□ -2
Trafd1Q3UDK1 Gm46193-201ENSMUST00000219399 364 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms