Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm22257-201ENSMUST00000158687 301 ntBASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm25749-201ENSMUST00000175485 111 ntBASIC3.66□□□□□ -1.82
Usp39Q3TIX9 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm37568-201ENSMUST00000191755 364 ntBASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm29704-201ENSMUST00000196011 253 ntBASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm18429-201ENSMUST00000198707 421 ntBASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm43155-201ENSMUST00000202661 494 ntBASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm44938-201ENSMUST00000208614 427 ntBASIC3.66□□□□□ -1.82
Usp39Q3TIX9 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm23443-201ENSMUST00000082916 128 ntBASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm25481-201ENSMUST00000083221 158 ntBASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm25755-201ENSMUST00000083396 107 ntBASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Usp39Q3TIX9 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Usp39Q3TIX9 AC101945.4-201ENSMUST00000228464 1976 ntBASIC3.65□□□□□ -1.82
Usp39Q3TIX9 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Usp39Q3TIX9 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.65□□□□□ -1.82
Usp39Q3TIX9 Gm23422-201ENSMUST00000102000 107 ntBASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Gm14880-201ENSMUST00000117581 292 ntBASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Gm8217-201ENSMUST00000119136 465 ntBASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Gm24501-201ENSMUST00000158452 62 ntBASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Gm24553-201ENSMUST00000158653 131 ntBASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Mir6715-201ENSMUST00000184990 57 ntBASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Gm27624-201ENSMUST00000185047 177 ntBASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Gm7837-201ENSMUST00000190873 412 ntBASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Gm6059-201ENSMUST00000196903 340 ntBASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Gm7407-201ENSMUST00000208301 568 ntBASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Gm44887-201ENSMUST00000208980 178 ntBASIC3.65□□□□□ -1.83
Usp39Q3TIX9 AC125374.2-201ENSMUST00000214278 162 ntBASIC3.65□□□□□ -1.83
Usp39Q3TIX9 AC133598.3-201ENSMUST00000224322 568 ntBASIC3.65□□□□□ -1.83
Usp39Q3TIX9 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Gm25202-201ENSMUST00000082838 191 ntBASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Gm22974-201ENSMUST00000083301 103 ntBASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Mir193a-201ENSMUST00000083461 66 ntBASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Usp39Q3TIX9 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Usp39Q3TIX9 AC133079.1-201ENSMUST00000220943 1881 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm13329-201ENSMUST00000117063 265 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm15783-201ENSMUST00000117521 633 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm11490-201ENSMUST00000118128 272 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm13876-201ENSMUST00000118451 261 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm11935-201ENSMUST00000118608 399 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm12647-201ENSMUST00000118977 265 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm13155-201ENSMUST00000119277 646 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm8178-201ENSMUST00000121570 646 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm13345-201ENSMUST00000121928 228 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm22598-201ENSMUST00000157600 127 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm17065-201ENSMUST00000165245 239 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm25956-201ENSMUST00000175115 217 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm27733-201ENSMUST00000184803 68 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm27997-201ENSMUST00000184942 69 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm45859-201ENSMUST00000212794 214 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 AC158622.1-201ENSMUST00000217107 230 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm4987-201ENSMUST00000078326 408 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm26446-201ENSMUST00000082455 103 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Snord47-201ENSMUST00000083034 77 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm23731-201ENSMUST00000083749 107 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm23741-201ENSMUST00000097237 171 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.64□□□□□ -1.83
Usp39Q3TIX9 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Usp39Q3TIX9 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.63□□□□□ -1.83
Usp39Q3TIX9 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.63□□□□□ -1.83
Usp39Q3TIX9 Mir690-201ENSMUST00000102110 109 ntBASIC3.63□□□□□ -1.83
Usp39Q3TIX9 Gm23577-201ENSMUST00000103950 110 ntBASIC3.63□□□□□ -1.83
Usp39Q3TIX9 Gm26147-201ENSMUST00000104479 114 ntBASIC3.63□□□□□ -1.83
Usp39Q3TIX9 Gm25727-201ENSMUST00000104522 131 ntBASIC3.63□□□□□ -1.83
Usp39Q3TIX9 Gm14627-201ENSMUST00000118931 567 ntBASIC3.63□□□□□ -1.83
Usp39Q3TIX9 Gm14694-201ENSMUST00000121856 282 ntBASIC3.63□□□□□ -1.83
Usp39Q3TIX9 Gm4916-201ENSMUST00000126139 642 ntBASIC3.63□□□□□ -1.83
Usp39Q3TIX9 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.63□□□□□ -1.83
Usp39Q3TIX9 Gm25486-201ENSMUST00000158726 63 ntBASIC3.63□□□□□ -1.83
Usp39Q3TIX9 Gm23312-201ENSMUST00000158774 102 ntBASIC3.63□□□□□ -1.83
Usp39Q3TIX9 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC3.63□□□□□ -1.83
Usp39Q3TIX9 Gm24520-201ENSMUST00000179510 110 ntBASIC3.63□□□□□ -1.83
Usp39Q3TIX9 Gm29062-201ENSMUST00000186032 694 ntBASIC3.63□□□□□ -1.83
Usp39Q3TIX9 Gm38183-201ENSMUST00000193189 205 ntBASIC3.63□□□□□ -1.83
Usp39Q3TIX9 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms