Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Gm15936-201ENSMUST00000118706 460 ntBASIC4.07□□□□□ -1.76
Ssrp1Q08943 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.07□□□□□ -1.76
Ssrp1Q08943 Gm27926-201ENSMUST00000157180 66 ntBASIC4.07□□□□□ -1.76
Ssrp1Q08943 Gm23957-201ENSMUST00000157209 90 ntBASIC4.07□□□□□ -1.76
Ssrp1Q08943 Gm22225-201ENSMUST00000157358 278 ntBASIC4.07□□□□□ -1.76
Ssrp1Q08943 Gm17186-201ENSMUST00000171742 456 ntBASIC4.07□□□□□ -1.76
Ssrp1Q08943 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Ssrp1Q08943 Gm37791-201ENSMUST00000195081 286 ntBASIC4.07□□□□□ -1.76
Ssrp1Q08943 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC4.07□□□□□ -1.76
Ssrp1Q08943 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.07□□□□□ -1.76
Ssrp1Q08943 Gm2710-201ENSMUST00000073196 603 ntBASIC4.07□□□□□ -1.76
Ssrp1Q08943 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ssrp1Q08943 Gm10042-201ENSMUST00000079884 78 ntBASIC4.07□□□□□ -1.76
Ssrp1Q08943 Gm22247-201ENSMUST00000082476 131 ntBASIC4.07□□□□□ -1.76
Ssrp1Q08943 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC4.07□□□□□ -1.76
Ssrp1Q08943 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ssrp1Q08943 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ssrp1Q08943 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ssrp1Q08943 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ssrp1Q08943 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ssrp1Q08943 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 Gm15088-201ENSMUST00000117973 1508 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 Gm15098-201ENSMUST00000119036 1508 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ssrp1Q08943 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.06□□□□□ -1.76
Ssrp1Q08943 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Ssrp1Q08943 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
Ssrp1Q08943 Gm13717-201ENSMUST00000119868 365 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 Gm13396-201ENSMUST00000120617 271 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC4.06□□□□□ -1.76
Ssrp1Q08943 Gm25486-201ENSMUST00000158726 63 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.06□□□□□ -1.76
Ssrp1Q08943 Gm24618-201ENSMUST00000177718 94 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 Gm23953-201ENSMUST00000178214 94 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 Gm26332-201ENSMUST00000179813 94 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 Gm22863-201ENSMUST00000180265 94 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 Mir6926-201ENSMUST00000184562 68 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC4.06□□□□□ -1.76
Ssrp1Q08943 Gm37698-201ENSMUST00000192605 463 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 Gm44475-201ENSMUST00000204041 424 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 Gm45403-201ENSMUST00000209453 276 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 Gm35857-201ENSMUST00000212739 178 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 AC155167.3-201ENSMUST00000226349 217 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 Gm9818-201ENSMUST00000050900 255 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Ssrp1Q08943 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ssrp1Q08943 Gm44164-201ENSMUST00000203605 2561 ntBASIC4.06□□□□□ -1.76
Ssrp1Q08943 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Ssrp1Q08943 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Ssrp1Q08943 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Ssrp1Q08943 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ssrp1Q08943 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ssrp1Q08943 Gm14518-201ENSMUST00000117351 542 ntBASIC4.05□□□□□ -1.76
Ssrp1Q08943 Gm23120-201ENSMUST00000157654 287 ntBASIC4.05□□□□□ -1.76
Ssrp1Q08943 Gm23257-201ENSMUST00000158322 132 ntBASIC4.05□□□□□ -1.76
Ssrp1Q08943 Gm24086-201ENSMUST00000175171 98 ntBASIC4.05□□□□□ -1.76
Ssrp1Q08943 Snord92-201ENSMUST00000175548 85 ntBASIC4.05□□□□□ -1.76
Ssrp1Q08943 Gm28650-201ENSMUST00000188413 411 ntBASIC4.05□□□□□ -1.76
Ssrp1Q08943 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Ssrp1Q08943 Gm43402-201ENSMUST00000197159 159 ntBASIC4.05□□□□□ -1.76
Ssrp1Q08943 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC4.05□□□□□ -1.76
Ssrp1Q08943 Gm45513-201ENSMUST00000210228 376 ntBASIC4.05□□□□□ -1.76
Ssrp1Q08943 Gm45273-201ENSMUST00000211559 281 ntBASIC4.05□□□□□ -1.76
Ssrp1Q08943 AC132384.5-201ENSMUST00000218562 226 ntBASIC4.05□□□□□ -1.76
Ssrp1Q08943 AC101984.1-201ENSMUST00000219639 402 ntBASIC4.05□□□□□ -1.76
Ssrp1Q08943 Gm19786-201ENSMUST00000222589 580 ntBASIC4.05□□□□□ -1.76
Ssrp1Q08943 AC164297.3-201ENSMUST00000224238 94 ntBASIC4.05□□□□□ -1.76
Ssrp1Q08943 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ssrp1Q08943 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ssrp1Q08943 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ssrp1Q08943 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Ssrp1Q08943 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ssrp1Q08943 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ssrp1Q08943 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ssrp1Q08943 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.04□□□□□ -1.76
Ssrp1Q08943 Gm42536-201ENSMUST00000197562 1613 ntBASIC4.04□□□□□ -1.76
Ssrp1Q08943 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ssrp1Q08943 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ssrp1Q08943 Gm14119-201ENSMUST00000119511 235 ntBASIC4.04□□□□□ -1.76
Ssrp1Q08943 Gm15029-201ENSMUST00000119742 199 ntBASIC4.04□□□□□ -1.76
Ssrp1Q08943 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.04□□□□□ -1.76
Ssrp1Q08943 Gm14581-201ENSMUST00000121726 198 ntBASIC4.04□□□□□ -1.76
Ssrp1Q08943 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ssrp1Q08943 Gm23112-201ENSMUST00000158606 125 ntBASIC4.04□□□□□ -1.76
Ssrp1Q08943 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.04□□□□□ -1.76
Ssrp1Q08943 Gm21816-201ENSMUST00000179255 360 ntBASIC4.04□□□□□ -1.76
Ssrp1Q08943 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ssrp1Q08943 Gm28534-201ENSMUST00000187744 676 ntBASIC4.04□□□□□ -1.76
Ssrp1Q08943 Gm37338-201ENSMUST00000191986 127 ntBASIC4.04□□□□□ -1.76
Ssrp1Q08943 Gm37343-201ENSMUST00000192542 111 ntBASIC4.04□□□□□ -1.76
Ssrp1Q08943 Gm9379-201ENSMUST00000196790 646 ntBASIC4.04□□□□□ -1.76
Ssrp1Q08943 Mir7227-201ENSMUST00000200408 59 ntBASIC4.04□□□□□ -1.76
Ssrp1Q08943 Gm44520-201ENSMUST00000205447 802 ntBASIC4.04□□□□□ -1.76
Ssrp1Q08943 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.04□□□□□ -1.76
Ssrp1Q08943 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ssrp1Q08943 Gm25141-201ENSMUST00000083177 107 ntBASIC4.04□□□□□ -1.76
Ssrp1Q08943 Gm23454-201ENSMUST00000083332 133 ntBASIC4.04□□□□□ -1.76
Ssrp1Q08943 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms