Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm22766-201ENSMUST00000158372 99 ntBASIC3.57□□□□□ -1.84
Col8a1Q00780 Gm22859-201ENSMUST00000174978 122 ntBASIC3.57□□□□□ -1.84
Col8a1Q00780 Gm29597-201ENSMUST00000188035 308 ntBASIC3.57□□□□□ -1.84
Col8a1Q00780 Gm37747-201ENSMUST00000193717 4003 ntBASIC3.57□□□□□ -1.84
Col8a1Q00780 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.57□□□□□ -1.84
Col8a1Q00780 Gm7726-201ENSMUST00000206241 231 ntBASIC3.57□□□□□ -1.84
Col8a1Q00780 Gm5002-201ENSMUST00000207145 223 ntBASIC3.57□□□□□ -1.84
Col8a1Q00780 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col8a1Q00780 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.57□□□□□ -1.84
Col8a1Q00780 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.57□□□□□ -1.84
Col8a1Q00780 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.57□□□□□ -1.84
Col8a1Q00780 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.57□□□□□ -1.84
Col8a1Q00780 Gm24817-201ENSMUST00000093672 105 ntBASIC3.57□□□□□ -1.84
Col8a1Q00780 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col8a1Q00780 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm38235-201ENSMUST00000194600 4952 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm43329-201ENSMUST00000200120 3232 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm650-201ENSMUST00000144428 1551 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm23990-201ENSMUST00000117031 117 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm11572-201ENSMUST00000119164 120 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm15313-201ENSMUST00000119179 282 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm14714-201ENSMUST00000119743 439 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm12640-201ENSMUST00000120097 310 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm25621-201ENSMUST00000157223 114 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm26373-201ENSMUST00000157833 103 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm22118-201ENSMUST00000175593 171 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm6651-201ENSMUST00000189471 271 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm29097-201ENSMUST00000190273 422 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm19243-201ENSMUST00000198592 269 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm43529-201ENSMUST00000199178 412 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm17811-201ENSMUST00000206193 387 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm44521-201ENSMUST00000206469 217 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm44960-201ENSMUST00000207403 141 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.56□□□□□ -1.84
Col8a1Q00780 AC154282.1-201ENSMUST00000223154 265 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col8a1Q00780 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col8a1Q00780 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm15304-201ENSMUST00000122150 2640 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Gm43594-201ENSMUST00000201153 3442 ntBASIC3.56□□□□□ -1.84
Col8a1Q00780 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col8a1Q00780 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col8a1Q00780 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm22590-201ENSMUST00000104247 128 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm12191-201ENSMUST00000118307 348 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm11429-201ENSMUST00000119089 144 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm9703-201ENSMUST00000119573 343 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm23887-201ENSMUST00000122683 172 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm25914-201ENSMUST00000157618 153 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm22097-201ENSMUST00000157929 278 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm24537-201ENSMUST00000157950 102 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm24739-201ENSMUST00000158855 292 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm17159-201ENSMUST00000169043 482 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm25535-201ENSMUST00000175364 125 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.55□□□□□ -1.84
Col8a1Q00780 Mir6996-201ENSMUST00000183922 61 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm7329-201ENSMUST00000185915 210 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm28830-201ENSMUST00000188192 213 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 AC133189.1-201ENSMUST00000198820 140 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm6615-201ENSMUST00000199426 631 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm44076-201ENSMUST00000203072 520 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm45273-201ENSMUST00000211559 281 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm18188-201ENSMUST00000219386 478 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Mir215-201ENSMUST00000083628 112 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm10343-201ENSMUST00000096279 348 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.55□□□□□ -1.84
Col8a1Q00780 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.55□□□□□ -1.84
Col8a1Q00780 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
Col8a1Q00780 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col8a1Q00780 BC051076-202ENSMUST00000199477 2868 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm36989-201ENSMUST00000193225 2160 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col8a1Q00780 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col8a1Q00780 Mir147-201ENSMUST00000102354 79 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Mir673-201ENSMUST00000102361 91 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col8a1Q00780 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm22026-201ENSMUST00000122735 281 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms