Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Lig3P97386 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.34□□□□□ -1.87
Lig3P97386 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Lig3P97386 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.34□□□□□ -1.87
Lig3P97386 Gm45273-201ENSMUST00000211559 281 ntBASIC3.34□□□□□ -1.87
Lig3P97386 Gm31849-201ENSMUST00000220306 375 ntBASIC3.34□□□□□ -1.87
Lig3P97386 Gm7753-201ENSMUST00000221007 867 ntBASIC3.34□□□□□ -1.87
Lig3P97386 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.34□□□□□ -1.87
Lig3P97386 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Lig3P97386 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Lig3P97386 Gm25792-201ENSMUST00000083289 100 ntBASIC3.34□□□□□ -1.87
Lig3P97386 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Lig3P97386 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Lig3P97386 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
Lig3P97386 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Lig3P97386 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Lig3P97386 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC3.33□□□□□ -1.88
Lig3P97386 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Lig3P97386 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Lig3P97386 Gm13761-201ENSMUST00000117238 807 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm9009-201ENSMUST00000117321 326 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm14518-201ENSMUST00000117351 542 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm12803-201ENSMUST00000118907 821 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm14428-201ENSMUST00000120408 822 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm13581-201ENSMUST00000120675 278 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm14364-201ENSMUST00000129209 267 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm24914-201ENSMUST00000157285 313 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm24060-201ENSMUST00000157494 95 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm23068-201ENSMUST00000158239 293 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm22521-201ENSMUST00000158272 134 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm23852-201ENSMUST00000158376 77 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm23016-201ENSMUST00000158431 62 ntBASIC3.33□□□□□ -1.88
Lig3P97386 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Lig3P97386 Gm28002-201ENSMUST00000184832 100 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm43521-201ENSMUST00000197838 255 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm43107-201ENSMUST00000198729 255 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Lig3P97386 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC3.33□□□□□ -1.88
Lig3P97386 Gm5955-201ENSMUST00000222712 219 ntBASIC3.33□□□□□ -1.88
Lig3P97386 AC167192.2-201ENSMUST00000224794 198 ntBASIC3.33□□□□□ -1.88
Lig3P97386 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm25079-201ENSMUST00000082529 203 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm25853-201ENSMUST00000082793 132 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm23515-201ENSMUST00000082829 107 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm24610-201ENSMUST00000083270 109 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm23136-201ENSMUST00000083425 99 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm3867-201ENSMUST00000086108 279 ntBASIC3.33□□□□□ -1.88
Lig3P97386 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Lig3P97386 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Lig3P97386 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.33□□□□□ -1.88
Lig3P97386 AC125532.1-201ENSMUST00000216210 2334 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.33□□□□□ -1.88
Lig3P97386 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Lig3P97386 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Lig3P97386 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Lig3P97386 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Lig3P97386 Gm11253-201ENSMUST00000118486 201 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Gm14566-201ENSMUST00000118915 321 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Gm8121-201ENSMUST00000153583 499 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Gm22136-201ENSMUST00000158751 268 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Gm23312-201ENSMUST00000158774 102 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Gm16038-201ENSMUST00000159317 193 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Mir3964-201ENSMUST00000174898 74 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Lig3P97386 Gm24306-201ENSMUST00000180229 79 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Gm27893-201ENSMUST00000184408 194 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Npn2-202ENSMUST00000189275 235 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Gm38019-201ENSMUST00000195133 380 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Gm37817-201ENSMUST00000195276 434 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Gm44468-201ENSMUST00000199516 105 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Gm19177-201ENSMUST00000204520 613 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.32□□□□□ -1.88
Lig3P97386 Gm45402-201ENSMUST00000211796 223 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Gm18015-201ENSMUST00000214879 316 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Gm18488-201ENSMUST00000215082 364 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Gm46194-201ENSMUST00000218136 320 ntBASIC3.32□□□□□ -1.88
Lig3P97386 AC147240.1-201ENSMUST00000218767 431 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Gm2436-201ENSMUST00000219562 774 ntBASIC3.32□□□□□ -1.88
Lig3P97386 AC116589.7-201ENSMUST00000221061 239 ntBASIC3.32□□□□□ -1.88
Lig3P97386 AC164117.1-201ENSMUST00000221726 239 ntBASIC3.32□□□□□ -1.88
Lig3P97386 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Gm26128-201ENSMUST00000083170 110 ntBASIC3.32□□□□□ -1.88
Lig3P97386 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Lig3P97386 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Lig3P97386 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.31□□□□□ -1.88
Lig3P97386 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Lig3P97386 Gm37761-201ENSMUST00000194989 2098 ntBASIC3.31□□□□□ -1.88
Lig3P97386 Gm650-201ENSMUST00000144428 1551 ntBASIC3.31□□□□□ -1.88
Lig3P97386 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Lig3P97386 Snord116l9-201ENSMUST00000101891 94 ntBASIC3.31□□□□□ -1.88
Lig3P97386 Gm26504-201ENSMUST00000102033 94 ntBASIC3.31□□□□□ -1.88
Lig3P97386 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Lig3P97386 Mir344c-201ENSMUST00000103919 92 ntBASIC3.31□□□□□ -1.88
Lig3P97386 Gm14883-201ENSMUST00000120179 157 ntBASIC3.31□□□□□ -1.88
Lig3P97386 Gm22479-201ENSMUST00000122566 81 ntBASIC3.31□□□□□ -1.88
Lig3P97386 Gm25270-201ENSMUST00000122606 138 ntBASIC3.31□□□□□ -1.88
Lig3P97386 Gm22187-201ENSMUST00000157819 129 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms