Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm7164-201ENSMUST00000117503 450 ntBASIC1.84□□□□□ -2.11
Cux1P53564 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Cux1P53564 Gm26701-201ENSMUST00000181571 234 ntBASIC1.84□□□□□ -2.11
Cux1P53564 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
Cux1P53564 Gm45701-201ENSMUST00000212049 235 ntBASIC1.84□□□□□ -2.11
Cux1P53564 Gm3442-201ENSMUST00000216808 710 ntBASIC1.84□□□□□ -2.11
Cux1P53564 AC159380.1-201ENSMUST00000218096 121 ntBASIC1.84□□□□□ -2.11
Cux1P53564 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.84□□□□□ -2.11
Cux1P53564 Gm24165-201ENSMUST00000082718 128 ntBASIC1.84□□□□□ -2.11
Cux1P53564 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.83□□□□□ -2.12
Cux1P53564 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Cux1P53564 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
Cux1P53564 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC1.83□□□□□ -2.12
Cux1P53564 Gm23328-201ENSMUST00000157418 132 ntBASIC1.83□□□□□ -2.12
Cux1P53564 Gm26186-201ENSMUST00000157689 125 ntBASIC1.83□□□□□ -2.12
Cux1P53564 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Cux1P53564 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC1.83□□□□□ -2.12
Cux1P53564 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC1.83□□□□□ -2.12
Cux1P53564 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.83□□□□□ -2.12
Cux1P53564 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Cux1P53564 Gm25856-201ENSMUST00000082786 75 ntBASIC1.83□□□□□ -2.12
Cux1P53564 Gm25097-201ENSMUST00000104042 145 ntBASIC1.82□□□□□ -2.12
Cux1P53564 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Cux1P53564 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.82□□□□□ -2.12
Cux1P53564 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.82□□□□□ -2.12
Cux1P53564 Gm23415-201ENSMUST00000175519 83 ntBASIC1.82□□□□□ -2.12
Cux1P53564 Gm21809-201ENSMUST00000178495 468 ntBASIC1.82□□□□□ -2.12
Cux1P53564 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Cux1P53564 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Cux1P53564 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Cux1P53564 Gm43739-201ENSMUST00000198294 307 ntBASIC1.82□□□□□ -2.12
Cux1P53564 AC167977.1-201ENSMUST00000221384 234 ntBASIC1.82□□□□□ -2.12
Cux1P53564 Gm35558-202ENSMUST00000221819 499 ntBASIC1.82□□□□□ -2.12
Cux1P53564 AC113031.2-201ENSMUST00000226132 579 ntBASIC1.82□□□□□ -2.12
Cux1P53564 Mir103-2-201ENSMUST00000083629 86 ntBASIC1.82□□□□□ -2.12
Cux1P53564 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.82□□□□□ -2.12
Cux1P53564 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC1.82□□□□□ -2.12
Cux1P53564 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Cux1P53564 Gm11429-201ENSMUST00000119089 144 ntBASIC1.81□□□□□ -2.12
Cux1P53564 Gm25321-201ENSMUST00000122558 102 ntBASIC1.81□□□□□ -2.12
Cux1P53564 Mir6402-201ENSMUST00000183406 80 ntBASIC1.81□□□□□ -2.12
Cux1P53564 Gm27265-201ENSMUST00000183559 77 ntBASIC1.81□□□□□ -2.12
Cux1P53564 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC1.81□□□□□ -2.12
Cux1P53564 Gm18551-201ENSMUST00000195594 642 ntBASIC1.81□□□□□ -2.12
Cux1P53564 Gm19202-201ENSMUST00000198096 808 ntBASIC1.81□□□□□ -2.12
Cux1P53564 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Cux1P53564 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC1.81□□□□□ -2.12
Cux1P53564 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.81□□□□□ -2.12
Cux1P53564 AC158395.1-201ENSMUST00000227206 452 ntBASIC1.81□□□□□ -2.12
Cux1P53564 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.81□□□□□ -2.12
Cux1P53564 Gm1989-201ENSMUST00000126244 636 ntBASIC1.81□□□□□ -2.12
Cux1P53564 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Cux1P53564 Gm16373-201ENSMUST00000129517 303 ntBASIC1.81□□□□□ -2.12
Cux1P53564 Gm25185-201ENSMUST00000157754 96 ntBASIC1.81□□□□□ -2.12
Cux1P53564 Gm29815-201ENSMUST00000202418 178 ntBASIC1.81□□□□□ -2.12
Cux1P53564 Gm44666-201ENSMUST00000208544 391 ntBASIC1.81□□□□□ -2.12
Cux1P53564 AC158392.1-201ENSMUST00000223720 1069 ntBASIC1.81□□□□□ -2.12
Cux1P53564 Mir22-201ENSMUST00000083595 95 ntBASIC1.81□□□□□ -2.12
Cux1P53564 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC1.8□□□□□ -2.12
Cux1P53564 Gm25506-201ENSMUST00000104339 70 ntBASIC1.8□□□□□ -2.12
Cux1P53564 Gm27999-201ENSMUST00000183539 193 ntBASIC1.8□□□□□ -2.12
Cux1P53564 Gm19066-201ENSMUST00000193232 1078 ntBASIC1.8□□□□□ -2.12
Cux1P53564 AC156952.1-201ENSMUST00000220361 793 ntBASIC1.8□□□□□ -2.12
Cux1P53564 AC124524.1-201ENSMUST00000225833 181 ntBASIC1.8□□□□□ -2.12
Cux1P53564 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
Cux1P53564 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Cux1P53564 Gm13541-201ENSMUST00000119519 283 ntBASIC1.79□□□□□ -2.12
Cux1P53564 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Cux1P53564 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Cux1P53564 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.79□□□□□ -2.12
Cux1P53564 Gm37987-201ENSMUST00000194999 825 ntBASIC1.79□□□□□ -2.12
Cux1P53564 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Cux1P53564 Gm45696-201ENSMUST00000212088 985 ntBASIC1.79□□□□□ -2.12
Cux1P53564 AC165284.1-201ENSMUST00000228614 458 ntBASIC1.79□□□□□ -2.12
Cux1P53564 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.79□□□□□ -2.12
Cux1P53564 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
Cux1P53564 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Cux1P53564 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC1.79□□□□□ -2.12
Cux1P53564 Gm16400-201ENSMUST00000116523 1029 ntBASIC1.78□□□□□ -2.12
Cux1P53564 Gm23588-201ENSMUST00000157659 99 ntBASIC1.78□□□□□ -2.12
Cux1P53564 Mir6383-201ENSMUST00000184545 116 ntBASIC1.78□□□□□ -2.12
Cux1P53564 Gm7897-201ENSMUST00000193981 554 ntBASIC1.78□□□□□ -2.12
Cux1P53564 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC1.78□□□□□ -2.12
Cux1P53564 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC1.78□□□□□ -2.12
Cux1P53564 Gm7171-201ENSMUST00000177413 1349 ntBASIC1.78□□□□□ -2.12
Cux1P53564 Gm14910-201ENSMUST00000121037 1805 ntBASIC1.78□□□□□ -2.13
Cux1P53564 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Cux1P53564 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.77□□□□□ -2.13
Cux1P53564 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Cux1P53564 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Cux1P53564 Gm44548-201ENSMUST00000208929 192 ntBASIC1.77□□□□□ -2.13
Cux1P53564 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.77□□□□□ -2.13
Cux1P53564 Gm22980-201ENSMUST00000082608 70 ntBASIC1.77□□□□□ -2.13
Cux1P53564 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
Cux1P53564 Gm13640-201ENSMUST00000118445 264 ntBASIC1.76□□□□□ -2.13
Cux1P53564 Gm27161-201ENSMUST00000183960 562 ntBASIC1.76□□□□□ -2.13
Cux1P53564 Gm17935-201ENSMUST00000196649 772 ntBASIC1.76□□□□□ -2.13
Cux1P53564 Gm45023-201ENSMUST00000207951 379 ntBASIC1.76□□□□□ -2.13
Cux1P53564 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
Cux1P53564 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms