Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ercc3P49135 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.66□□□□□ -1.82
Ercc3P49135 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.66□□□□□ -1.82
Ercc3P49135 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.66□□□□□ -1.82
Ercc3P49135 Gm9762-201ENSMUST00000036976 444 ntBASIC3.66□□□□□ -1.82
Ercc3P49135 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.66□□□□□ -1.82
Ercc3P49135 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.66□□□□□ -1.82
Ercc3P49135 Gm10343-201ENSMUST00000096279 348 ntBASIC3.66□□□□□ -1.82
Ercc3P49135 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ercc3P49135 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ercc3P49135 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ercc3P49135 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
Ercc3P49135 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Ercc3P49135 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Ercc3P49135 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ercc3P49135 Gm14448-201ENSMUST00000116383 210 ntBASIC3.65□□□□□ -1.83
Ercc3P49135 Gm15282-201ENSMUST00000117707 300 ntBASIC3.65□□□□□ -1.83
Ercc3P49135 Gm13085-201ENSMUST00000118356 171 ntBASIC3.65□□□□□ -1.83
Ercc3P49135 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.65□□□□□ -1.83
Ercc3P49135 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.65□□□□□ -1.83
Ercc3P49135 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.65□□□□□ -1.83
Ercc3P49135 Gm22322-201ENSMUST00000157151 111 ntBASIC3.65□□□□□ -1.83
Ercc3P49135 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Ercc3P49135 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Ercc3P49135 Gm8151-201ENSMUST00000184817 871 ntBASIC3.65□□□□□ -1.83
Ercc3P49135 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC3.65□□□□□ -1.83
Ercc3P49135 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ercc3P49135 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ercc3P49135 AC162387.1-201ENSMUST00000213369 213 ntBASIC3.65□□□□□ -1.83
Ercc3P49135 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.65□□□□□ -1.83
Ercc3P49135 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ercc3P49135 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.65□□□□□ -1.83
Ercc3P49135 AC116656.1-201ENSMUST00000227040 755 ntBASIC3.65□□□□□ -1.83
Ercc3P49135 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ercc3P49135 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ercc3P49135 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
Ercc3P49135 Gm26228-201ENSMUST00000082512 107 ntBASIC3.65□□□□□ -1.83
Ercc3P49135 Gm25080-201ENSMUST00000082526 107 ntBASIC3.65□□□□□ -1.83
Ercc3P49135 Gm24948-201ENSMUST00000082866 207 ntBASIC3.65□□□□□ -1.83
Ercc3P49135 Gm25518-201ENSMUST00000083864 107 ntBASIC3.65□□□□□ -1.83
Ercc3P49135 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ercc3P49135 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.65□□□□□ -1.83
Ercc3P49135 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.64□□□□□ -1.83
Ercc3P49135 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.64□□□□□ -1.83
Ercc3P49135 AC163660.3-201ENSMUST00000224253 1563 ntBASIC3.64□□□□□ -1.83
Ercc3P49135 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ercc3P49135 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.64□□□□□ -1.83
Ercc3P49135 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC3.64□□□□□ -1.83
Ercc3P49135 Gm13210-201ENSMUST00000121483 273 ntBASIC3.64□□□□□ -1.83
Ercc3P49135 Gm15065-201ENSMUST00000121699 273 ntBASIC3.64□□□□□ -1.83
Ercc3P49135 Gm11414-201ENSMUST00000121795 263 ntBASIC3.64□□□□□ -1.83
Ercc3P49135 Gm24546-201ENSMUST00000158652 102 ntBASIC3.64□□□□□ -1.83
Ercc3P49135 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Ercc3P49135 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC3.64□□□□□ -1.83
Ercc3P49135 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC3.64□□□□□ -1.83
Ercc3P49135 Gm42818-201ENSMUST00000198869 987 ntBASIC3.64□□□□□ -1.83
Ercc3P49135 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ercc3P49135 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3.64□□□□□ -1.83
Ercc3P49135 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.64□□□□□ -1.83
Ercc3P49135 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ercc3P49135 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Ercc3P49135 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Ercc3P49135 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.63□□□□□ -1.83
Ercc3P49135 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC3.63□□□□□ -1.83
Ercc3P49135 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ercc3P49135 Gm13443-201ENSMUST00000120770 555 ntBASIC3.63□□□□□ -1.83
Ercc3P49135 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.63□□□□□ -1.83
Ercc3P49135 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC3.63□□□□□ -1.83
Ercc3P49135 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.63□□□□□ -1.83
Ercc3P49135 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ercc3P49135 Rny3-201ENSMUST00000083011 102 ntBASIC3.63□□□□□ -1.83
Ercc3P49135 Mir452-201ENSMUST00000093629 85 ntBASIC3.63□□□□□ -1.83
Ercc3P49135 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.63□□□□□ -1.83
Ercc3P49135 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ercc3P49135 Gm7853-201ENSMUST00000100708 478 ntBASIC3.62□□□□□ -1.83
Ercc3P49135 Gm22936-201ENSMUST00000103955 126 ntBASIC3.62□□□□□ -1.83
Ercc3P49135 Gm25407-201ENSMUST00000104102 134 ntBASIC3.62□□□□□ -1.83
Ercc3P49135 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.62□□□□□ -1.83
Ercc3P49135 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.62□□□□□ -1.83
Ercc3P49135 Gm26414-201ENSMUST00000157674 269 ntBASIC3.62□□□□□ -1.83
Ercc3P49135 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC3.62□□□□□ -1.83
Ercc3P49135 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.62□□□□□ -1.83
Ercc3P49135 Gm19694-201ENSMUST00000192364 505 ntBASIC3.62□□□□□ -1.83
Ercc3P49135 Gm43402-201ENSMUST00000197159 159 ntBASIC3.62□□□□□ -1.83
Ercc3P49135 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC3.62□□□□□ -1.83
Ercc3P49135 AC131720.2-201ENSMUST00000220420 431 ntBASIC3.62□□□□□ -1.83
Ercc3P49135 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC3.62□□□□□ -1.83
Ercc3P49135 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.62□□□□□ -1.83
Ercc3P49135 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ercc3P49135 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ercc3P49135 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ercc3P49135 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ercc3P49135 Gm7071-201ENSMUST00000120458 462 ntBASIC3.61□□□□□ -1.83
Ercc3P49135 Gm14841-201ENSMUST00000121067 758 ntBASIC3.61□□□□□ -1.83
Ercc3P49135 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.61□□□□□ -1.83
Ercc3P49135 Gm22038-201ENSMUST00000157277 242 ntBASIC3.61□□□□□ -1.83
Ercc3P49135 Gm26088-201ENSMUST00000157896 131 ntBASIC3.61□□□□□ -1.83
Ercc3P49135 Cfap61-214ENSMUST00000167179 183 ntBASIC3.61□□□□□ -1.83
Ercc3P49135 Gm8114-201ENSMUST00000172225 484 ntBASIC3.61□□□□□ -1.83
Ercc3P49135 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms