Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm25427-201ENSMUST00000157605 103 ntBASIC4.78□□□□□ -1.64
Rfx1P48377 Gm26171-201ENSMUST00000158422 131 ntBASIC4.78□□□□□ -1.64
Rfx1P48377 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.78□□□□□ -1.64
Rfx1P48377 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.78□□□□□ -1.64
Rfx1P48377 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC4.78□□□□□ -1.64
Rfx1P48377 Gm42570-201ENSMUST00000195937 292 ntBASIC4.78□□□□□ -1.64
Rfx1P48377 Gm43250-201ENSMUST00000196536 273 ntBASIC4.78□□□□□ -1.64
Rfx1P48377 Gm43600-201ENSMUST00000202134 223 ntBASIC4.78□□□□□ -1.64
Rfx1P48377 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Rfx1P48377 Gm22358-201ENSMUST00000082877 122 ntBASIC4.78□□□□□ -1.64
Rfx1P48377 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.78□□□□□ -1.64
Rfx1P48377 Gm25188-201ENSMUST00000083913 122 ntBASIC4.78□□□□□ -1.64
Rfx1P48377 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Rfx1P48377 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Rfx1P48377 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Rfx1P48377 Gm43663-201ENSMUST00000198643 1505 ntBASIC4.77□□□□□ -1.65
Rfx1P48377 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Rfx1P48377 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.77□□□□□ -1.65
Rfx1P48377 Gm22779-201ENSMUST00000104085 107 ntBASIC4.77□□□□□ -1.65
Rfx1P48377 Gm24318-201ENSMUST00000104490 131 ntBASIC4.77□□□□□ -1.65
Rfx1P48377 Gm15313-201ENSMUST00000119179 282 ntBASIC4.77□□□□□ -1.65
Rfx1P48377 Gm15026-201ENSMUST00000119219 458 ntBASIC4.77□□□□□ -1.65
Rfx1P48377 Defa-ps8-201ENSMUST00000120972 279 ntBASIC4.77□□□□□ -1.65
Rfx1P48377 Gm25908-201ENSMUST00000157624 98 ntBASIC4.77□□□□□ -1.65
Rfx1P48377 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Rfx1P48377 Mir6975-201ENSMUST00000184879 61 ntBASIC4.77□□□□□ -1.65
Rfx1P48377 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.77□□□□□ -1.65
Rfx1P48377 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC4.77□□□□□ -1.65
Rfx1P48377 Gm43583-201ENSMUST00000199235 303 ntBASIC4.77□□□□□ -1.65
Rfx1P48377 Gm23517-201ENSMUST00000082830 192 ntBASIC4.77□□□□□ -1.65
Rfx1P48377 Gm25401-201ENSMUST00000082975 106 ntBASIC4.77□□□□□ -1.65
Rfx1P48377 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Rfx1P48377 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Rfx1P48377 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Rfx1P48377 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Rfx1P48377 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Rfx1P48377 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.76□□□□□ -1.65
Rfx1P48377 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.76□□□□□ -1.65
Rfx1P48377 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.76□□□□□ -1.65
Rfx1P48377 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Rfx1P48377 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Rfx1P48377 Gm11819-201ENSMUST00000122192 372 ntBASIC4.76□□□□□ -1.65
Rfx1P48377 Gm24629-201ENSMUST00000122762 89 ntBASIC4.76□□□□□ -1.65
Rfx1P48377 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.76□□□□□ -1.65
Rfx1P48377 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Rfx1P48377 Mir1942-201ENSMUST00000157274 63 ntBASIC4.76□□□□□ -1.65
Rfx1P48377 Gm23829-201ENSMUST00000157392 270 ntBASIC4.76□□□□□ -1.65
Rfx1P48377 Gm23641-201ENSMUST00000157857 101 ntBASIC4.76□□□□□ -1.65
Rfx1P48377 Gm24959-201ENSMUST00000157924 146 ntBASIC4.76□□□□□ -1.65
Rfx1P48377 Gm5967-201ENSMUST00000172723 494 ntBASIC4.76□□□□□ -1.65
Rfx1P48377 Gm24818-201ENSMUST00000175093 161 ntBASIC4.76□□□□□ -1.65
Rfx1P48377 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC4.76□□□□□ -1.65
Rfx1P48377 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.76□□□□□ -1.65
Rfx1P48377 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Rfx1P48377 Gm38060-201ENSMUST00000194822 464 ntBASIC4.76□□□□□ -1.65
Rfx1P48377 Gm38088-201ENSMUST00000195829 241 ntBASIC4.76□□□□□ -1.65
Rfx1P48377 Gm44475-201ENSMUST00000204041 424 ntBASIC4.76□□□□□ -1.65
Rfx1P48377 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC4.76□□□□□ -1.65
Rfx1P48377 Gm45651-201ENSMUST00000210857 335 ntBASIC4.76□□□□□ -1.65
Rfx1P48377 AC105958.2-201ENSMUST00000214167 191 ntBASIC4.76□□□□□ -1.65
Rfx1P48377 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC4.76□□□□□ -1.65
Rfx1P48377 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.76□□□□□ -1.65
Rfx1P48377 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.76□□□□□ -1.65
Rfx1P48377 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Rfx1P48377 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Rfx1P48377 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Rfx1P48377 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Rfx1P48377 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Rfx1P48377 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Rfx1P48377 Gm26275-201ENSMUST00000157101 268 ntBASIC4.75□□□□□ -1.65
Rfx1P48377 Gm23231-201ENSMUST00000157299 104 ntBASIC4.75□□□□□ -1.65
Rfx1P48377 Gm22225-201ENSMUST00000157358 278 ntBASIC4.75□□□□□ -1.65
Rfx1P48377 Gm26024-201ENSMUST00000158657 322 ntBASIC4.75□□□□□ -1.65
Rfx1P48377 Gm20450-201ENSMUST00000173652 147 ntBASIC4.75□□□□□ -1.65
Rfx1P48377 Gm27387-201ENSMUST00000184583 116 ntBASIC4.75□□□□□ -1.65
Rfx1P48377 Mir6899-201ENSMUST00000184798 64 ntBASIC4.75□□□□□ -1.65
Rfx1P48377 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC4.75□□□□□ -1.65
Rfx1P48377 Gm5372-201ENSMUST00000187540 409 ntBASIC4.75□□□□□ -1.65
Rfx1P48377 Gm37361-201ENSMUST00000194345 132 ntBASIC4.75□□□□□ -1.65
Rfx1P48377 Gm6051-201ENSMUST00000201529 352 ntBASIC4.75□□□□□ -1.65
Rfx1P48377 Gm44977-201ENSMUST00000205283 420 ntBASIC4.75□□□□□ -1.65
Rfx1P48377 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC4.75□□□□□ -1.65
Rfx1P48377 Gm22685-201ENSMUST00000082848 106 ntBASIC4.75□□□□□ -1.65
Rfx1P48377 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.75□□□□□ -1.65
Rfx1P48377 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Rfx1P48377 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Rfx1P48377 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Rfx1P48377 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Rfx1P48377 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Rfx1P48377 Gm22488-201ENSMUST00000116811 127 ntBASIC4.74□□□□□ -1.65
Rfx1P48377 Gm12173-201ENSMUST00000117622 273 ntBASIC4.74□□□□□ -1.65
Rfx1P48377 Gm15180-201ENSMUST00000117745 492 ntBASIC4.74□□□□□ -1.65
Rfx1P48377 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Rfx1P48377 Gm25665-201ENSMUST00000157695 110 ntBASIC4.74□□□□□ -1.65
Rfx1P48377 Gm25456-201ENSMUST00000157952 109 ntBASIC4.74□□□□□ -1.65
Rfx1P48377 Gm22516-201ENSMUST00000158266 124 ntBASIC4.74□□□□□ -1.65
Rfx1P48377 Gm23702-201ENSMUST00000158840 130 ntBASIC4.74□□□□□ -1.65
Rfx1P48377 Gm23053-201ENSMUST00000175136 96 ntBASIC4.74□□□□□ -1.65
Rfx1P48377 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.74□□□□□ -1.65
Rfx1P48377 Gm23355-201ENSMUST00000177614 107 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms