Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
HttP42859 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC0.9□□□□□ -2.27
HttP42859 Gm16129-201ENSMUST00000152628 486 ntBASIC0.9□□□□□ -2.27
HttP42859 Gm22646-201ENSMUST00000175130 115 ntBASIC0.9□□□□□ -2.27
HttP42859 Gm43198-201ENSMUST00000200927 326 ntBASIC0.9□□□□□ -2.27
HttP42859 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
HttP42859 Gm11935-201ENSMUST00000118608 399 ntBASIC0.89□□□□□ -2.27
HttP42859 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
HttP42859 Trav12-4-201ENSMUST00000200663 271 ntBASIC0.89□□□□□ -2.27
HttP42859 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
HttP42859 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC0.89□□□□□ -2.27
HttP42859 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC0.89□□□□□ -2.27
HttP42859 Gm14894-201ENSMUST00000117170 270 ntBASIC0.89□□□□□ -2.27
HttP42859 Gm14659-201ENSMUST00000117667 843 ntBASIC0.89□□□□□ -2.27
HttP42859 Gm13210-201ENSMUST00000121483 273 ntBASIC0.89□□□□□ -2.27
HttP42859 Gm22603-201ENSMUST00000157603 96 ntBASIC0.89□□□□□ -2.27
HttP42859 Gm37449-201ENSMUST00000193016 270 ntBASIC0.89□□□□□ -2.27
HttP42859 Gm18658-201ENSMUST00000195558 270 ntBASIC0.89□□□□□ -2.27
HttP42859 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC0.89□□□□□ -2.27
HttP42859 Gm45636-201ENSMUST00000210497 1064 ntBASIC0.89□□□□□ -2.27
HttP42859 Snord32a-201ENSMUST00000083285 83 ntBASIC0.89□□□□□ -2.27
HttP42859 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.89□□□□□ -2.27
HttP42859 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
HttP42859 Gm11386-201ENSMUST00000117761 347 ntBASIC0.89□□□□□ -2.27
HttP42859 Trav5n-3-201ENSMUST00000164511 270 ntBASIC0.89□□□□□ -2.27
HttP42859 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
HttP42859 Mir3109-201ENSMUST00000175301 88 ntBASIC0.89□□□□□ -2.27
HttP42859 Mir6346-201ENSMUST00000183982 81 ntBASIC0.89□□□□□ -2.27
HttP42859 AC111046.1-201ENSMUST00000217715 412 ntBASIC0.89□□□□□ -2.27
HttP42859 AC153950.1-201ENSMUST00000219916 3238 ntBASIC0.88□□□□□ -2.27
HttP42859 Gm26154-201ENSMUST00000102339 96 ntBASIC0.88□□□□□ -2.27
HttP42859 Gm14709-201ENSMUST00000121225 304 ntBASIC0.88□□□□□ -2.27
HttP42859 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC0.88□□□□□ -2.27
HttP42859 Gm3104-201ENSMUST00000171004 473 ntBASIC0.88□□□□□ -2.27
HttP42859 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.88□□□□□ -2.27
HttP42859 Mir6541-201ENSMUST00000183649 110 ntBASIC0.88□□□□□ -2.27
HttP42859 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
HttP42859 Gm29920-201ENSMUST00000206876 754 ntBASIC0.88□□□□□ -2.27
HttP42859 Gm33654-201ENSMUST00000221704 215 ntBASIC0.88□□□□□ -2.27
HttP42859 Gm22454-201ENSMUST00000082583 107 ntBASIC0.88□□□□□ -2.27
HttP42859 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.88□□□□□ -2.27
HttP42859 Gm35570-201ENSMUST00000198730 681 ntBASIC0.88□□□□□ -2.27
HttP42859 Mir7217-201ENSMUST00000200304 62 ntBASIC0.88□□□□□ -2.27
HttP42859 Gm45590-201ENSMUST00000209715 262 ntBASIC0.88□□□□□ -2.27
HttP42859 AC121942.2-201ENSMUST00000223824 600 ntBASIC0.88□□□□□ -2.27
HttP42859 Gm37879-201ENSMUST00000193112 1995 ntBASIC0.87□□□□□ -2.27
HttP42859 Gm6272-201ENSMUST00000121256 171 ntBASIC0.87□□□□□ -2.27
HttP42859 Gm26363-201ENSMUST00000158866 83 ntBASIC0.87□□□□□ -2.27
HttP42859 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
HttP42859 Gm3496-201ENSMUST00000188283 745 ntBASIC0.87□□□□□ -2.27
HttP42859 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC0.87□□□□□ -2.27
HttP42859 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
HttP42859 Gm23335-201ENSMUST00000117021 90 ntBASIC0.87□□□□□ -2.27
HttP42859 Gm14840-201ENSMUST00000122135 594 ntBASIC0.87□□□□□ -2.27
HttP42859 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
HttP42859 Gm22794-201ENSMUST00000157228 306 ntBASIC0.87□□□□□ -2.27
HttP42859 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.87□□□□□ -2.27
HttP42859 Gm43284-201ENSMUST00000200103 253 ntBASIC0.87□□□□□ -2.27
HttP42859 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
HttP42859 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC0.87□□□□□ -2.27
HttP42859 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.87□□□□□ -2.27
HttP42859 Gm24559-201ENSMUST00000157519 121 ntBASIC0.86□□□□□ -2.27
HttP42859 Gm22163-201ENSMUST00000158408 135 ntBASIC0.86□□□□□ -2.27
HttP42859 Gm18892-201ENSMUST00000217628 881 ntBASIC0.86□□□□□ -2.27
HttP42859 AC122393.3-201ENSMUST00000226343 1059 ntBASIC0.86□□□□□ -2.27
HttP42859 Mir574-201ENSMUST00000103854 78 ntBASIC0.86□□□□□ -2.27
HttP42859 Gm23476-201ENSMUST00000158881 274 ntBASIC0.86□□□□□ -2.27
HttP42859 Gm29553-201ENSMUST00000189692 279 ntBASIC0.86□□□□□ -2.27
HttP42859 Gm37361-201ENSMUST00000194345 132 ntBASIC0.86□□□□□ -2.27
HttP42859 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC0.86□□□□□ -2.27
HttP42859 Gm28155-201ENSMUST00000191066 151 ntBASIC0.86□□□□□ -2.27
HttP42859 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC0.86□□□□□ -2.27
HttP42859 Gm18861-201ENSMUST00000202509 1186 ntBASIC0.86□□□□□ -2.27
HttP42859 Gm45530-201ENSMUST00000211658 225 ntBASIC0.86□□□□□ -2.27
HttP42859 AC164567.2-201ENSMUST00000219363 445 ntBASIC0.86□□□□□ -2.27
HttP42859 AC130222.1-201ENSMUST00000221198 256 ntBASIC0.86□□□□□ -2.27
HttP42859 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
HttP42859 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
HttP42859 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HttP42859 Snrpert-201ENSMUST00000121967 279 ntBASIC0.85□□□□□ -2.27
HttP42859 Gm23324-201ENSMUST00000157421 131 ntBASIC0.85□□□□□ -2.27
HttP42859 Gm38080-201ENSMUST00000194035 268 ntBASIC0.85□□□□□ -2.27
HttP42859 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
HttP42859 Gm22245-201ENSMUST00000082479 103 ntBASIC0.85□□□□□ -2.27
HttP42859 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
HttP42859 Gm22489-201ENSMUST00000116813 62 ntBASIC0.84□□□□□ -2.27
HttP42859 Gm24551-201ENSMUST00000158645 92 ntBASIC0.84□□□□□ -2.27
HttP42859 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC0.84□□□□□ -2.28
HttP42859 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.84□□□□□ -2.28
HttP42859 Gm6954-201ENSMUST00000117416 225 ntBASIC0.84□□□□□ -2.28
HttP42859 Gm25625-201ENSMUST00000157221 96 ntBASIC0.84□□□□□ -2.28
HttP42859 Gm2389-201ENSMUST00000160487 189 ntBASIC0.84□□□□□ -2.28
HttP42859 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC0.84□□□□□ -2.28
HttP42859 Gm3867-201ENSMUST00000086108 279 ntBASIC0.84□□□□□ -2.28
HttP42859 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
HttP42859 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
HttP42859 Gm24865-201ENSMUST00000103246 96 ntBASIC0.83□□□□□ -2.28
HttP42859 Gm23036-201ENSMUST00000157885 99 ntBASIC0.83□□□□□ -2.28
HttP42859 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
HttP42859 Gm27974-201ENSMUST00000183415 105 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms