Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm43804-201ENSMUST00000198280 456 ntBASIC3.15□□□□□ -1.91
Traf1P39428 Gm18635-201ENSMUST00000199020 1060 ntBASIC3.15□□□□□ -1.91
Traf1P39428 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.15□□□□□ -1.91
Traf1P39428 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC3.15□□□□□ -1.91
Traf1P39428 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.15□□□□□ -1.91
Traf1P39428 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.15□□□□□ -1.91
Traf1P39428 Gm45288-201ENSMUST00000210236 151 ntBASIC3.15□□□□□ -1.91
Traf1P39428 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.15□□□□□ -1.91
Traf1P39428 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
Traf1P39428 Gm22810-201ENSMUST00000082741 158 ntBASIC3.15□□□□□ -1.91
Traf1P39428 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Traf1P39428 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.15□□□□□ -1.91
Traf1P39428 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.15□□□□□ -1.91
Traf1P39428 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Traf1P39428 Gm14445-201ENSMUST00000117051 1484 ntBASIC3.15□□□□□ -1.91
Traf1P39428 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Traf1P39428 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.14□□□□□ -1.91
Traf1P39428 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.14□□□□□ -1.91
Traf1P39428 Gm22486-201ENSMUST00000116815 137 ntBASIC3.14□□□□□ -1.91
Traf1P39428 Gm12878-201ENSMUST00000118744 332 ntBASIC3.14□□□□□ -1.91
Traf1P39428 Gm11407-201ENSMUST00000120362 1058 ntBASIC3.14□□□□□ -1.91
Traf1P39428 Gm12617-201ENSMUST00000121268 381 ntBASIC3.14□□□□□ -1.91
Traf1P39428 Gm11471-201ENSMUST00000121824 198 ntBASIC3.14□□□□□ -1.91
Traf1P39428 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Traf1P39428 Gm22597-201ENSMUST00000157602 80 ntBASIC3.14□□□□□ -1.91
Traf1P39428 Gm23352-201ENSMUST00000158428 64 ntBASIC3.14□□□□□ -1.91
Traf1P39428 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Traf1P39428 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Traf1P39428 Gm22131-201ENSMUST00000178415 94 ntBASIC3.14□□□□□ -1.91
Traf1P39428 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.14□□□□□ -1.91
Traf1P39428 Gm27028-201ENSMUST00000182303 399 ntBASIC3.14□□□□□ -1.91
Traf1P39428 Gm28745-201ENSMUST00000190069 305 ntBASIC3.14□□□□□ -1.91
Traf1P39428 Gm37000-201ENSMUST00000193058 428 ntBASIC3.14□□□□□ -1.91
Traf1P39428 Gm37807-201ENSMUST00000194310 190 ntBASIC3.14□□□□□ -1.91
Traf1P39428 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.14□□□□□ -1.91
Traf1P39428 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.14□□□□□ -1.91
Traf1P39428 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.14□□□□□ -1.91
Traf1P39428 AC156795.1-201ENSMUST00000214655 414 ntBASIC3.14□□□□□ -1.91
Traf1P39428 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Traf1P39428 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC3.14□□□□□ -1.91
Traf1P39428 Gm10343-201ENSMUST00000096279 348 ntBASIC3.14□□□□□ -1.91
Traf1P39428 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Traf1P39428 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Traf1P39428 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.14□□□□□ -1.91
Traf1P39428 AC167192.3-201ENSMUST00000224096 1567 ntBASIC3.13□□□□□ -1.91
Traf1P39428 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Traf1P39428 Gm15106-201ENSMUST00000119691 821 ntBASIC3.13□□□□□ -1.91
Traf1P39428 Gm13581-201ENSMUST00000120675 278 ntBASIC3.13□□□□□ -1.91
Traf1P39428 Gm14049-201ENSMUST00000121009 636 ntBASIC3.13□□□□□ -1.91
Traf1P39428 Gm25808-201ENSMUST00000122784 284 ntBASIC3.13□□□□□ -1.91
Traf1P39428 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.13□□□□□ -1.91
Traf1P39428 Gm24475-201ENSMUST00000157435 143 ntBASIC3.13□□□□□ -1.91
Traf1P39428 Gm23588-201ENSMUST00000157659 99 ntBASIC3.13□□□□□ -1.91
Traf1P39428 Gm22330-201ENSMUST00000158068 115 ntBASIC3.13□□□□□ -1.91
Traf1P39428 Gm23409-201ENSMUST00000158516 237 ntBASIC3.13□□□□□ -1.91
Traf1P39428 Gm24464-201ENSMUST00000179697 107 ntBASIC3.13□□□□□ -1.91
Traf1P39428 Gm27245-201ENSMUST00000184385 376 ntBASIC3.13□□□□□ -1.91
Traf1P39428 Gm28744-201ENSMUST00000189939 340 ntBASIC3.13□□□□□ -1.91
Traf1P39428 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC3.13□□□□□ -1.91
Traf1P39428 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.13□□□□□ -1.91
Traf1P39428 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.13□□□□□ -1.91
Traf1P39428 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.13□□□□□ -1.91
Traf1P39428 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.13□□□□□ -1.91
Traf1P39428 Gm23096-201ENSMUST00000083447 107 ntBASIC3.13□□□□□ -1.91
Traf1P39428 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Traf1P39428 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Traf1P39428 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC3.12□□□□□ -1.91
Traf1P39428 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Traf1P39428 Gm14417-201ENSMUST00000120036 1074 ntBASIC3.12□□□□□ -1.91
Traf1P39428 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.12□□□□□ -1.91
Traf1P39428 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC3.12□□□□□ -1.91
Traf1P39428 Gm23137-201ENSMUST00000157559 107 ntBASIC3.12□□□□□ -1.91
Traf1P39428 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC3.12□□□□□ -1.91
Traf1P39428 Gm20718-201ENSMUST00000176058 259 ntBASIC3.12□□□□□ -1.91
Traf1P39428 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Traf1P39428 Gm17946-201ENSMUST00000186856 538 ntBASIC3.12□□□□□ -1.91
Traf1P39428 Gm28647-201ENSMUST00000188416 197 ntBASIC3.12□□□□□ -1.91
Traf1P39428 Gm28299-201ENSMUST00000189908 339 ntBASIC3.12□□□□□ -1.91
Traf1P39428 Gm37353-201ENSMUST00000194497 313 ntBASIC3.12□□□□□ -1.91
Traf1P39428 Trbv24-201ENSMUST00000194614 347 ntBASIC3.12□□□□□ -1.91
Traf1P39428 Gm44387-201ENSMUST00000196298 145 ntBASIC3.12□□□□□ -1.91
Traf1P39428 Gm43402-201ENSMUST00000197159 159 ntBASIC3.12□□□□□ -1.91
Traf1P39428 Gm29848-201ENSMUST00000203107 295 ntBASIC3.12□□□□□ -1.91
Traf1P39428 Gm44472-201ENSMUST00000204922 943 ntBASIC3.12□□□□□ -1.91
Traf1P39428 Gm44966-201ENSMUST00000208096 157 ntBASIC3.12□□□□□ -1.91
Traf1P39428 AC173482.2-201ENSMUST00000224044 750 ntBASIC3.12□□□□□ -1.91
Traf1P39428 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Traf1P39428 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Traf1P39428 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
Traf1P39428 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Traf1P39428 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Traf1P39428 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Traf1P39428 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.11□□□□□ -1.91
Traf1P39428 Gm22936-201ENSMUST00000103955 126 ntBASIC3.11□□□□□ -1.91
Traf1P39428 Gm22782-201ENSMUST00000104082 132 ntBASIC3.11□□□□□ -1.91
Traf1P39428 Gm22674-201ENSMUST00000104413 131 ntBASIC3.11□□□□□ -1.91
Traf1P39428 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.11□□□□□ -1.91
Traf1P39428 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Traf1P39428 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.11□□□□□ -1.91
Traf1P39428 Gm25624-201ENSMUST00000157222 275 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 116.7 ms