Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 Mir682-201ENSMUST00000102281 96 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm11785-201ENSMUST00000120165 601 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm23078-201ENSMUST00000157848 148 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm23352-201ENSMUST00000158428 64 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm17538-201ENSMUST00000168236 327 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm5116-201ENSMUST00000187732 463 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm29627-201ENSMUST00000187984 463 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm28779-201ENSMUST00000189678 323 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm43355-201ENSMUST00000196541 346 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm43669-201ENSMUST00000198229 436 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm44526-201ENSMUST00000204664 121 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm44961-201ENSMUST00000207450 196 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm18414-201ENSMUST00000210858 694 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm20304-201ENSMUST00000218168 444 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Cd40lgP27548 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Cd40lgP27548 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.37□□□□□ -2.03
Cd40lgP27548 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Cd40lgP27548 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Cd40lgP27548 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Cd40lgP27548 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm25876-201ENSMUST00000104329 119 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Snora36b-201ENSMUST00000104383 132 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm26474-201ENSMUST00000116762 122 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm12697-201ENSMUST00000118008 667 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm14918-201ENSMUST00000118153 268 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm15760-201ENSMUST00000119553 283 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm13581-201ENSMUST00000120675 278 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm22452-201ENSMUST00000122804 104 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm15878-201ENSMUST00000127561 306 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm26186-201ENSMUST00000157689 125 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm24959-201ENSMUST00000157924 146 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm6788-201ENSMUST00000166459 270 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Cd40lgP27548 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm27755-201ENSMUST00000184623 132 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm7837-201ENSMUST00000190873 412 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 AC144733.1-201ENSMUST00000222893 1289 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm23264-201ENSMUST00000083372 107 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm25411-201ENSMUST00000083760 151 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm10343-201ENSMUST00000096279 348 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC2.36□□□□□ -2.03
Cd40lgP27548 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Cd40lgP27548 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.36□□□□□ -2.03
Cd40lgP27548 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Cd40lgP27548 AC134917.1-201ENSMUST00000220517 1449 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm26247-201ENSMUST00000116702 91 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm6574-201ENSMUST00000120037 362 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm23206-201ENSMUST00000122720 184 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm24681-201ENSMUST00000158760 107 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm8207-201ENSMUST00000171204 502 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm25670-201ENSMUST00000178423 107 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm26239-201ENSMUST00000178842 107 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm24267-201ENSMUST00000179841 107 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm28755-201ENSMUST00000185773 199 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm29516-201ENSMUST00000190402 468 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm43556-201ENSMUST00000196186 681 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Cd40lgP27548 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.35□□□□□ -2.03
Cd40lgP27548 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm22810-201ENSMUST00000082741 158 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm24035-201ENSMUST00000082867 107 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm24292-201ENSMUST00000082888 107 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm23723-201ENSMUST00000082996 132 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm5670-201ENSMUST00000093546 372 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Cd40lgP27548 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.35□□□□□ -2.03
Cd40lgP27548 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms