Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.51□□□□□ -1.69
RaraP11416 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RaraP11416 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.51□□□□□ -1.69
RaraP11416 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RaraP11416 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.51□□□□□ -1.69
RaraP11416 Gm21032-201ENSMUST00000208108 2578 ntBASIC4.51□□□□□ -1.69
RaraP11416 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.51□□□□□ -1.69
RaraP11416 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RaraP11416 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
RaraP11416 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RaraP11416 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RaraP11416 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RaraP11416 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RaraP11416 Gm26367-201ENSMUST00000104165 132 ntBASIC4.5□□□□□ -1.69
RaraP11416 Gm25220-201ENSMUST00000157546 95 ntBASIC4.5□□□□□ -1.69
RaraP11416 Gm23640-201ENSMUST00000157860 104 ntBASIC4.5□□□□□ -1.69
RaraP11416 Gm24084-201ENSMUST00000175173 137 ntBASIC4.5□□□□□ -1.69
RaraP11416 Gm19427-201ENSMUST00000183619 208 ntBASIC4.5□□□□□ -1.69
RaraP11416 Mir6540-201ENSMUST00000184886 108 ntBASIC4.5□□□□□ -1.69
RaraP11416 Gm29022-201ENSMUST00000190702 225 ntBASIC4.5□□□□□ -1.69
RaraP11416 Gm43427-201ENSMUST00000198188 331 ntBASIC4.5□□□□□ -1.69
RaraP11416 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.5□□□□□ -1.69
RaraP11416 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.5□□□□□ -1.69
RaraP11416 Gm44757-201ENSMUST00000206373 157 ntBASIC4.5□□□□□ -1.69
RaraP11416 AC101945.1-201ENSMUST00000226734 466 ntBASIC4.5□□□□□ -1.69
RaraP11416 Mecom-201ENSMUST00000061088 348 ntBASIC4.5□□□□□ -1.69
RaraP11416 Gm23454-201ENSMUST00000083332 133 ntBASIC4.5□□□□□ -1.69
RaraP11416 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RaraP11416 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.5□□□□□ -1.69
RaraP11416 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.5□□□□□ -1.69
RaraP11416 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RaraP11416 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RaraP11416 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RaraP11416 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RaraP11416 Gm5596-201ENSMUST00000207988 2421 ntBASIC4.5□□□□□ -1.69
RaraP11416 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RaraP11416 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
RaraP11416 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RaraP11416 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RaraP11416 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RaraP11416 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RaraP11416 Gm13343-201ENSMUST00000116474 105 ntBASIC4.49□□□□□ -1.69
RaraP11416 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC4.49□□□□□ -1.69
RaraP11416 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC4.49□□□□□ -1.69
RaraP11416 Gm24594-201ENSMUST00000122502 99 ntBASIC4.49□□□□□ -1.69
RaraP11416 Gm22453-201ENSMUST00000122801 318 ntBASIC4.49□□□□□ -1.69
RaraP11416 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.49□□□□□ -1.69
RaraP11416 Gm25015-201ENSMUST00000158400 128 ntBASIC4.49□□□□□ -1.69
RaraP11416 Gm22135-201ENSMUST00000158752 108 ntBASIC4.49□□□□□ -1.69
RaraP11416 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RaraP11416 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RaraP11416 Spin2g-201ENSMUST00000178425 687 ntBASIC4.49□□□□□ -1.69
RaraP11416 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.49□□□□□ -1.69
RaraP11416 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.49□□□□□ -1.69
RaraP11416 Gm20144-201ENSMUST00000203031 165 ntBASIC4.49□□□□□ -1.69
RaraP11416 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.49□□□□□ -1.69
RaraP11416 Gm44032-201ENSMUST00000204841 166 ntBASIC4.49□□□□□ -1.69
RaraP11416 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.49□□□□□ -1.69
RaraP11416 AC115735.2-201ENSMUST00000227135 351 ntBASIC4.49□□□□□ -1.69
RaraP11416 Gm7381-201ENSMUST00000098958 300 ntBASIC4.49□□□□□ -1.69
RaraP11416 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RaraP11416 AC153526.2-201ENSMUST00000218206 2031 ntBASIC4.49□□□□□ -1.69
RaraP11416 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RaraP11416 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RaraP11416 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RaraP11416 Gm10033-201ENSMUST00000072427 1813 ntBASIC4.49□□□□□ -1.69
RaraP11416 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm24125-201ENSMUST00000104105 137 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm24788-201ENSMUST00000104283 156 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm24469-201ENSMUST00000104487 131 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm14894-201ENSMUST00000117170 270 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm13567-201ENSMUST00000118026 247 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm13478-201ENSMUST00000118312 413 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm11693-201ENSMUST00000119625 565 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm14551-201ENSMUST00000120802 256 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm13210-201ENSMUST00000121483 273 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm15065-201ENSMUST00000121699 273 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm23887-201ENSMUST00000122683 172 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm24224-201ENSMUST00000158828 258 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm16303-201ENSMUST00000161498 390 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm27805-201ENSMUST00000184513 79 ntBASIC4.48□□□□□ -1.69
RaraP11416 Mir7047-201ENSMUST00000184595 64 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm27899-201ENSMUST00000184715 64 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm37449-201ENSMUST00000193016 270 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm18658-201ENSMUST00000195558 270 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm44481-201ENSMUST00000197288 84 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm44339-201ENSMUST00000200598 84 ntBASIC4.48□□□□□ -1.69
RaraP11416 Gm44871-201ENSMUST00000207821 497 ntBASIC4.48□□□□□ -1.69
RaraP11416 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC4.48□□□□□ -1.69
RaraP11416 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.48□□□□□ -1.69
RaraP11416 AC113031.4-201ENSMUST00000228381 514 ntBASIC4.48□□□□□ -1.69
RaraP11416 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
RaraP11416 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RaraP11416 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.47□□□□□ -1.69
RaraP11416 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RaraP11416 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.47□□□□□ -1.69
RaraP11416 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RaraP11416 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 174.2 ms