Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 AC192334.2-201ENSMUST00000223087 1091 ntBASIC2.74□□□□□ -1.97
Lire1P11260 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.74□□□□□ -1.97
Lire1P11260 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Lire1P11260 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Lire1P11260 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.73□□□□□ -1.97
Lire1P11260 Gm26002-201ENSMUST00000101915 107 ntBASIC2.73□□□□□ -1.97
Lire1P11260 Gm24068-201ENSMUST00000104513 132 ntBASIC2.73□□□□□ -1.97
Lire1P11260 Gm11471-201ENSMUST00000121824 198 ntBASIC2.73□□□□□ -1.97
Lire1P11260 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.73□□□□□ -1.97
Lire1P11260 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.73□□□□□ -1.97
Lire1P11260 Gm22322-201ENSMUST00000157151 111 ntBASIC2.73□□□□□ -1.97
Lire1P11260 Gm27330-201ENSMUST00000184689 132 ntBASIC2.73□□□□□ -1.97
Lire1P11260 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.73□□□□□ -1.97
Lire1P11260 Gm24350-202ENSMUST00000198309 132 ntBASIC2.73□□□□□ -1.97
Lire1P11260 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.73□□□□□ -1.97
Lire1P11260 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Lire1P11260 Gm43550-201ENSMUST00000200597 303 ntBASIC2.73□□□□□ -1.97
Lire1P11260 Gm44472-201ENSMUST00000204922 943 ntBASIC2.73□□□□□ -1.97
Lire1P11260 Gm44519-201ENSMUST00000206486 122 ntBASIC2.73□□□□□ -1.97
Lire1P11260 Gm44609-201ENSMUST00000207157 460 ntBASIC2.73□□□□□ -1.97
Lire1P11260 Gm45590-201ENSMUST00000209715 262 ntBASIC2.73□□□□□ -1.97
Lire1P11260 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.73□□□□□ -1.97
Lire1P11260 Mir16-2-201ENSMUST00000083672 95 ntBASIC2.73□□□□□ -1.97
Lire1P11260 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Lire1P11260 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Lire1P11260 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Lire1P11260 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
Lire1P11260 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Lire1P11260 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.72□□□□□ -1.97
Lire1P11260 Gm25317-201ENSMUST00000116824 129 ntBASIC2.72□□□□□ -1.97
Lire1P11260 Gm14670-201ENSMUST00000117327 337 ntBASIC2.72□□□□□ -1.97
Lire1P11260 Gm15312-201ENSMUST00000118827 271 ntBASIC2.72□□□□□ -1.97
Lire1P11260 Gm15309-201ENSMUST00000121644 240 ntBASIC2.72□□□□□ -1.97
Lire1P11260 Gm26061-201ENSMUST00000175584 108 ntBASIC2.72□□□□□ -1.97
Lire1P11260 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.72□□□□□ -1.97
Lire1P11260 Gm38238-201ENSMUST00000194334 346 ntBASIC2.72□□□□□ -1.97
Lire1P11260 Trbv24-201ENSMUST00000194614 347 ntBASIC2.72□□□□□ -1.97
Lire1P11260 Gm7039-201ENSMUST00000205138 346 ntBASIC2.72□□□□□ -1.97
Lire1P11260 Gm45445-201ENSMUST00000209586 232 ntBASIC2.72□□□□□ -1.97
Lire1P11260 AC091260.1-201ENSMUST00000216112 229 ntBASIC2.72□□□□□ -1.97
Lire1P11260 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Lire1P11260 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.72□□□□□ -1.97
Lire1P11260 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Lire1P11260 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Lire1P11260 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.72□□□□□ -1.97
Lire1P11260 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Lire1P11260 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.97
Lire1P11260 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Lire1P11260 Gm25088-201ENSMUST00000101803 79 ntBASIC2.71□□□□□ -1.98
Lire1P11260 Gm22779-201ENSMUST00000104085 107 ntBASIC2.71□□□□□ -1.98
Lire1P11260 Gm13355-201ENSMUST00000117996 317 ntBASIC2.71□□□□□ -1.98
Lire1P11260 Gm24213-201ENSMUST00000158255 258 ntBASIC2.71□□□□□ -1.98
Lire1P11260 Gm8292-201ENSMUST00000162574 396 ntBASIC2.71□□□□□ -1.98
Lire1P11260 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.71□□□□□ -1.98
Lire1P11260 Gm18416-201ENSMUST00000175635 1003 ntBASIC2.71□□□□□ -1.98
Lire1P11260 Gm26585-201ENSMUST00000180890 630 ntBASIC2.71□□□□□ -1.98
Lire1P11260 Gm19257-201ENSMUST00000186121 183 ntBASIC2.71□□□□□ -1.98
Lire1P11260 Gm29335-201ENSMUST00000188361 459 ntBASIC2.71□□□□□ -1.98
Lire1P11260 Gm7837-201ENSMUST00000190873 412 ntBASIC2.71□□□□□ -1.98
Lire1P11260 Gm42805-201ENSMUST00000196158 276 ntBASIC2.71□□□□□ -1.98
Lire1P11260 Gm32222-201ENSMUST00000203296 298 ntBASIC2.71□□□□□ -1.98
Lire1P11260 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC2.71□□□□□ -1.98
Lire1P11260 Gm44688-201ENSMUST00000209083 537 ntBASIC2.71□□□□□ -1.98
Lire1P11260 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
Lire1P11260 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Lire1P11260 AC167669.3-201ENSMUST00000224720 393 ntBASIC2.71□□□□□ -1.98
Lire1P11260 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.71□□□□□ -1.98
Lire1P11260 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.71□□□□□ -1.98
Lire1P11260 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Lire1P11260 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.7□□□□□ -1.98
Lire1P11260 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.7□□□□□ -1.98
Lire1P11260 Gm25624-201ENSMUST00000157222 275 ntBASIC2.7□□□□□ -1.98
Lire1P11260 Gm22143-201ENSMUST00000157401 203 ntBASIC2.7□□□□□ -1.98
Lire1P11260 Gm22535-201ENSMUST00000158174 119 ntBASIC2.7□□□□□ -1.98
Lire1P11260 Gm24056-201ENSMUST00000158617 146 ntBASIC2.7□□□□□ -1.98
Lire1P11260 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Lire1P11260 Gm20656-201ENSMUST00000176925 518 ntBASIC2.7□□□□□ -1.98
Lire1P11260 Gm27505-201ENSMUST00000185071 110 ntBASIC2.7□□□□□ -1.98
Lire1P11260 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2.7□□□□□ -1.98
Lire1P11260 Gm28628-201ENSMUST00000187006 264 ntBASIC2.7□□□□□ -1.98
Lire1P11260 Gm28629-201ENSMUST00000187309 263 ntBASIC2.7□□□□□ -1.98
Lire1P11260 Gm6140-201ENSMUST00000192494 966 ntBASIC2.7□□□□□ -1.98
Lire1P11260 Gm43804-201ENSMUST00000198280 456 ntBASIC2.7□□□□□ -1.98
Lire1P11260 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.7□□□□□ -1.98
Lire1P11260 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.7□□□□□ -1.98
Lire1P11260 AC111046.1-201ENSMUST00000217715 412 ntBASIC2.7□□□□□ -1.98
Lire1P11260 AC140477.1-201ENSMUST00000222354 246 ntBASIC2.7□□□□□ -1.98
Lire1P11260 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.7□□□□□ -1.98
Lire1P11260 Gm25582-201ENSMUST00000083412 110 ntBASIC2.7□□□□□ -1.98
Lire1P11260 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Lire1P11260 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
Lire1P11260 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.7□□□□□ -1.98
Lire1P11260 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Lire1P11260 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Lire1P11260 Mir1195-201ENSMUST00000116818 98 ntBASIC2.69□□□□□ -1.98
Lire1P11260 Gm12656-201ENSMUST00000118149 577 ntBASIC2.69□□□□□ -1.98
Lire1P11260 Gm24691-201ENSMUST00000157762 140 ntBASIC2.69□□□□□ -1.98
Lire1P11260 Gm25706-201ENSMUST00000157828 247 ntBASIC2.69□□□□□ -1.98
Lire1P11260 Gm25361-201ENSMUST00000179358 76 ntBASIC2.69□□□□□ -1.98
Lire1P11260 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms