Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 AC161758.1-201ENSMUST00000226123 310 ntBASIC3.27□□□□□ -1.89
Col3a1P08121 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col3a1P08121 Snord38a-201ENSMUST00000083746 71 ntBASIC3.27□□□□□ -1.89
Col3a1P08121 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col3a1P08121 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Col3a1P08121 Gm43924-201ENSMUST00000204851 1736 ntBASIC3.26□□□□□ -1.89
Col3a1P08121 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col3a1P08121 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col3a1P08121 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col3a1P08121 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Col3a1P08121 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col3a1P08121 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.26□□□□□ -1.89
Col3a1P08121 Gm23431-201ENSMUST00000104006 107 ntBASIC3.26□□□□□ -1.89
Col3a1P08121 Gm23653-201ENSMUST00000116751 97 ntBASIC3.26□□□□□ -1.89
Col3a1P08121 Gm15382-201ENSMUST00000118011 537 ntBASIC3.26□□□□□ -1.89
Col3a1P08121 Gm14292-201ENSMUST00000118761 456 ntBASIC3.26□□□□□ -1.89
Col3a1P08121 Gm13356-201ENSMUST00000121678 335 ntBASIC3.26□□□□□ -1.89
Col3a1P08121 Gm22084-201ENSMUST00000157585 105 ntBASIC3.26□□□□□ -1.89
Col3a1P08121 Gm28299-201ENSMUST00000189908 339 ntBASIC3.26□□□□□ -1.89
Col3a1P08121 Gm43115-201ENSMUST00000196244 160 ntBASIC3.26□□□□□ -1.89
Col3a1P08121 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Col3a1P08121 Gm18696-201ENSMUST00000220103 274 ntBASIC3.26□□□□□ -1.89
Col3a1P08121 Gm46996-201ENSMUST00000220924 408 ntBASIC3.26□□□□□ -1.89
Col3a1P08121 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.26□□□□□ -1.89
Col3a1P08121 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.26□□□□□ -1.89
Col3a1P08121 Gm25401-201ENSMUST00000082975 106 ntBASIC3.26□□□□□ -1.89
Col3a1P08121 Gm23679-201ENSMUST00000083161 119 ntBASIC3.26□□□□□ -1.89
Col3a1P08121 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Col3a1P08121 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC3.26□□□□□ -1.89
Col3a1P08121 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.26□□□□□ -1.89
Col3a1P08121 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col3a1P08121 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col3a1P08121 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col3a1P08121 Gm25213-201ENSMUST00000102388 113 ntBASIC3.25□□□□□ -1.89
Col3a1P08121 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Col3a1P08121 Gm24683-201ENSMUST00000104840 88 ntBASIC3.25□□□□□ -1.89
Col3a1P08121 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col3a1P08121 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col3a1P08121 Gm9850-201ENSMUST00000117916 227 ntBASIC3.25□□□□□ -1.89
Col3a1P08121 Gm22073-201ENSMUST00000122668 189 ntBASIC3.25□□□□□ -1.89
Col3a1P08121 Gm23332-201ENSMUST00000157424 275 ntBASIC3.25□□□□□ -1.89
Col3a1P08121 Gm25428-201ENSMUST00000157608 114 ntBASIC3.25□□□□□ -1.89
Col3a1P08121 Gm24729-201ENSMUST00000158225 137 ntBASIC3.25□□□□□ -1.89
Col3a1P08121 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC3.25□□□□□ -1.89
Col3a1P08121 Gm25670-201ENSMUST00000178423 107 ntBASIC3.25□□□□□ -1.89
Col3a1P08121 Gm26239-201ENSMUST00000178842 107 ntBASIC3.25□□□□□ -1.89
Col3a1P08121 Gm24267-201ENSMUST00000179841 107 ntBASIC3.25□□□□□ -1.89
Col3a1P08121 Gm28974-201ENSMUST00000187893 231 ntBASIC3.25□□□□□ -1.89
Col3a1P08121 Gm36891-201ENSMUST00000191995 655 ntBASIC3.25□□□□□ -1.89
Col3a1P08121 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC3.25□□□□□ -1.89
Col3a1P08121 Gm45742-201ENSMUST00000212400 433 ntBASIC3.25□□□□□ -1.89
Col3a1P08121 Gm45710-201ENSMUST00000212847 215 ntBASIC3.25□□□□□ -1.89
Col3a1P08121 Gm24292-201ENSMUST00000082888 107 ntBASIC3.25□□□□□ -1.89
Col3a1P08121 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Col3a1P08121 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.25□□□□□ -1.89
Col3a1P08121 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.25□□□□□ -1.89
Col3a1P08121 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col3a1P08121 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 Gm25563-201ENSMUST00000104603 74 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 Gm24937-201ENSMUST00000122597 134 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 Gm23118-201ENSMUST00000122657 187 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 Gm23579-201ENSMUST00000158528 103 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col3a1P08121 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col3a1P08121 Gm29475-201ENSMUST00000190767 312 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 Gm28408-201ENSMUST00000191557 463 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC3.24□□□□□ -1.89
Col3a1P08121 Gm37743-201ENSMUST00000194645 376 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 Gm36985-201ENSMUST00000195595 379 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col3a1P08121 Gm43142-201ENSMUST00000198670 361 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 Gm45588-201ENSMUST00000211213 630 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col3a1P08121 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col3a1P08121 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col3a1P08121 Gm24037-201ENSMUST00000082871 180 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 Olfr575-201ENSMUST00000084812 957 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
Col3a1P08121 Gm43662-201ENSMUST00000198310 2271 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col3a1P08121 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 Gm7709-201ENSMUST00000199391 1858 ntBASIC3.24□□□□□ -1.89
Col3a1P08121 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col3a1P08121 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col3a1P08121 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col3a1P08121 Mir466b-8-201ENSMUST00000103883 86 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Gm25565-201ENSMUST00000104605 105 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Gm15025-201ENSMUST00000118434 418 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Gm15195-201ENSMUST00000118775 263 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Gm14731-201ENSMUST00000119216 376 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Gm12935-201ENSMUST00000119352 246 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Gm15267-201ENSMUST00000120888 464 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Gm14972-201ENSMUST00000121780 364 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Defb44-ps-201ENSMUST00000126871 219 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Gm25827-201ENSMUST00000157089 107 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms