Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Gm6265-201ENSMUST00000149263 231 ntBASIC3.31□□□□□ -1.88
Hcn3O88705 Gm24914-201ENSMUST00000157285 313 ntBASIC3.31□□□□□ -1.88
Hcn3O88705 Gm26149-201ENSMUST00000157432 108 ntBASIC3.31□□□□□ -1.88
Hcn3O88705 Gm27905-201ENSMUST00000184005 207 ntBASIC3.31□□□□□ -1.88
Hcn3O88705 Gm27189-201ENSMUST00000184119 190 ntBASIC3.31□□□□□ -1.88
Hcn3O88705 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.31□□□□□ -1.88
Hcn3O88705 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.31□□□□□ -1.88
Hcn3O88705 Gm37343-201ENSMUST00000192542 111 ntBASIC3.31□□□□□ -1.88
Hcn3O88705 Gm37239-201ENSMUST00000193510 141 ntBASIC3.31□□□□□ -1.88
Hcn3O88705 Gm7871-201ENSMUST00000195346 618 ntBASIC3.31□□□□□ -1.88
Hcn3O88705 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.31□□□□□ -1.88
Hcn3O88705 Gm43529-201ENSMUST00000199178 412 ntBASIC3.31□□□□□ -1.88
Hcn3O88705 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.31□□□□□ -1.88
Hcn3O88705 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.31□□□□□ -1.88
Hcn3O88705 Gm44446-201ENSMUST00000204864 255 ntBASIC3.31□□□□□ -1.88
Hcn3O88705 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.31□□□□□ -1.88
Hcn3O88705 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.31□□□□□ -1.88
Hcn3O88705 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.31□□□□□ -1.88
Hcn3O88705 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.31□□□□□ -1.88
Hcn3O88705 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.31□□□□□ -1.88
Hcn3O88705 Gm22507-201ENSMUST00000082773 160 ntBASIC3.31□□□□□ -1.88
Hcn3O88705 Gm23042-201ENSMUST00000083866 101 ntBASIC3.31□□□□□ -1.88
Hcn3O88705 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.31□□□□□ -1.88
Hcn3O88705 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.31□□□□□ -1.88
Hcn3O88705 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Hcn3O88705 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Hcn3O88705 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Hcn3O88705 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Hcn3O88705 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Hcn3O88705 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Hcn3O88705 Mir693-201ENSMUST00000102187 89 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm22021-201ENSMUST00000104353 107 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Hcn3O88705 Gm14593-201ENSMUST00000119948 294 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm14269-201ENSMUST00000120455 306 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm14578-201ENSMUST00000122166 391 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.3□□□□□ -1.88
Hcn3O88705 Gm23592-201ENSMUST00000157859 117 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm21842-201ENSMUST00000177552 498 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm21626-201ENSMUST00000177791 498 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm21562-201ENSMUST00000177888 498 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm21539-201ENSMUST00000177925 498 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm21599-201ENSMUST00000178249 498 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm21914-201ENSMUST00000178452 498 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm21723-201ENSMUST00000178692 498 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm21916-201ENSMUST00000178771 498 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm21801-201ENSMUST00000178865 498 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm21633-201ENSMUST00000178941 498 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm21821-201ENSMUST00000179646 498 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm21588-201ENSMUST00000180074 498 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm21780-201ENSMUST00000180128 498 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm21572-201ENSMUST00000180134 498 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm21529-201ENSMUST00000180175 498 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm27869-201ENSMUST00000184327 122 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm29370-202ENSMUST00000187476 499 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.3□□□□□ -1.88
Hcn3O88705 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.3□□□□□ -1.88
Hcn3O88705 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm6012-201ENSMUST00000210821 730 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm5023-201ENSMUST00000217442 587 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Snord42a-201ENSMUST00000082606 65 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Gm25207-201ENSMUST00000093745 107 ntBASIC3.3□□□□□ -1.88
Hcn3O88705 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
Hcn3O88705 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Hcn3O88705 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Hcn3O88705 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Hcn3O88705 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.29□□□□□ -1.88
Hcn3O88705 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.29□□□□□ -1.88
Hcn3O88705 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Hcn3O88705 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Hcn3O88705 Gm24671-201ENSMUST00000104159 158 ntBASIC3.29□□□□□ -1.88
Hcn3O88705 Gm24890-201ENSMUST00000104389 102 ntBASIC3.29□□□□□ -1.88
Hcn3O88705 Gm14980-201ENSMUST00000121247 736 ntBASIC3.29□□□□□ -1.88
Hcn3O88705 Gm11363-201ENSMUST00000121672 548 ntBASIC3.29□□□□□ -1.88
Hcn3O88705 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.29□□□□□ -1.88
Hcn3O88705 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.29□□□□□ -1.88
Hcn3O88705 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.29□□□□□ -1.88
Hcn3O88705 Gm22560-201ENSMUST00000157332 120 ntBASIC3.29□□□□□ -1.88
Hcn3O88705 Gm22085-201ENSMUST00000158344 110 ntBASIC3.29□□□□□ -1.88
Hcn3O88705 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC3.29□□□□□ -1.88
Hcn3O88705 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC3.29□□□□□ -1.88
Hcn3O88705 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC3.29□□□□□ -1.88
Hcn3O88705 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC3.29□□□□□ -1.88
Hcn3O88705 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC3.29□□□□□ -1.88
Hcn3O88705 Gm23793-201ENSMUST00000179396 117 ntBASIC3.29□□□□□ -1.88
Hcn3O88705 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC3.29□□□□□ -1.88
Hcn3O88705 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC3.29□□□□□ -1.88
Hcn3O88705 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC3.29□□□□□ -1.88
Hcn3O88705 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Hcn3O88705 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.29□□□□□ -1.88
Hcn3O88705 Mir6413-201ENSMUST00000184049 108 ntBASIC3.29□□□□□ -1.88
Hcn3O88705 Gm8242-202ENSMUST00000193056 475 ntBASIC3.29□□□□□ -1.88
Hcn3O88705 Trav15n-3-201ENSMUST00000200498 168 ntBASIC3.29□□□□□ -1.88
Hcn3O88705 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.29□□□□□ -1.88
Hcn3O88705 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC3.29□□□□□ -1.88
Hcn3O88705 Gm25929-201ENSMUST00000082784 107 ntBASIC3.29□□□□□ -1.88
Hcn3O88705 Gm23970-201ENSMUST00000083319 107 ntBASIC3.29□□□□□ -1.88
Hcn3O88705 Mir208a-201ENSMUST00000083498 83 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 115 ms