Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm22417-201ENSMUST00000178656 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Snord116l2-201ENSMUST00000178675 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Gm26270-201ENSMUST00000178690 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Snord116l16-201ENSMUST00000178777 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Gm23313-201ENSMUST00000178931 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Snord116l17-201ENSMUST00000178936 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Gm23089-201ENSMUST00000178947 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Snord116l10-201ENSMUST00000179053 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Gm24153-201ENSMUST00000179280 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Gm25597-201ENSMUST00000179388 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Snord116l1-201ENSMUST00000179518 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Gm25816-201ENSMUST00000179764 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Snord116l8-201ENSMUST00000179889 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Snord116l7-201ENSMUST00000179895 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Snord116l5-201ENSMUST00000179927 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Snord116l6-201ENSMUST00000179955 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Gm26188-201ENSMUST00000179963 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Gm26433-201ENSMUST00000180227 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Snord116l11-201ENSMUST00000180312 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Gm22128-201ENSMUST00000180346 94 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Mir6351-201ENSMUST00000183826 99 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Gm27248-201ENSMUST00000184004 166 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Gm44232-201ENSMUST00000204537 225 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.57□□□□□ -2.16
Sdc4O35988 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 AC117656.3-204ENSMUST00000225656 859 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.57□□□□□ -2.16
Sdc4O35988 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Sdc4O35988 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.56□□□□□ -2.16
Sdc4O35988 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Sdc4O35988 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC1.56□□□□□ -2.16
Sdc4O35988 Gm15115-201ENSMUST00000121145 264 ntBASIC1.56□□□□□ -2.16
Sdc4O35988 Gm24002-201ENSMUST00000158456 104 ntBASIC1.56□□□□□ -2.16
Sdc4O35988 Gm25658-201ENSMUST00000158472 128 ntBASIC1.56□□□□□ -2.16
Sdc4O35988 Gm24174-201ENSMUST00000158933 111 ntBASIC1.56□□□□□ -2.16
Sdc4O35988 Mir5101-201ENSMUST00000175181 83 ntBASIC1.56□□□□□ -2.16
Sdc4O35988 Gm24417-201ENSMUST00000178123 79 ntBASIC1.56□□□□□ -2.16
Sdc4O35988 Gm24653-201ENSMUST00000178541 79 ntBASIC1.56□□□□□ -2.16
Sdc4O35988 Gm25934-201ENSMUST00000178642 79 ntBASIC1.56□□□□□ -2.16
Sdc4O35988 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC1.56□□□□□ -2.16
Sdc4O35988 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC1.56□□□□□ -2.16
Sdc4O35988 Gm18414-201ENSMUST00000210858 694 ntBASIC1.56□□□□□ -2.16
Sdc4O35988 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.56□□□□□ -2.16
Sdc4O35988 AC121960.3-201ENSMUST00000227077 623 ntBASIC1.56□□□□□ -2.16
Sdc4O35988 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.56□□□□□ -2.16
Sdc4O35988 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Sdc4O35988 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Sdc4O35988 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
Sdc4O35988 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Sdc4O35988 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Sdc4O35988 Gm14073-201ENSMUST00000117344 381 ntBASIC1.55□□□□□ -2.16
Sdc4O35988 Gm13085-201ENSMUST00000118356 171 ntBASIC1.55□□□□□ -2.16
Sdc4O35988 Gm12313-201ENSMUST00000121347 421 ntBASIC1.55□□□□□ -2.16
Sdc4O35988 Gm12872-201ENSMUST00000121835 320 ntBASIC1.55□□□□□ -2.16
Sdc4O35988 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.55□□□□□ -2.16
Sdc4O35988 Gm14363-201ENSMUST00000122304 409 ntBASIC1.55□□□□□ -2.16
Sdc4O35988 Gm14129-201ENSMUST00000122436 291 ntBASIC1.55□□□□□ -2.16
Sdc4O35988 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC1.55□□□□□ -2.16
Sdc4O35988 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.55□□□□□ -2.16
Sdc4O35988 Gm13194-201ENSMUST00000142299 311 ntBASIC1.55□□□□□ -2.16
Sdc4O35988 Gm22693-201ENSMUST00000175049 442 ntBASIC1.55□□□□□ -2.16
Sdc4O35988 Mir3473c-201ENSMUST00000175262 81 ntBASIC1.55□□□□□ -2.16
Sdc4O35988 Mir3066-201ENSMUST00000175296 83 ntBASIC1.55□□□□□ -2.16
Sdc4O35988 Gm22716-201ENSMUST00000177596 107 ntBASIC1.55□□□□□ -2.16
Sdc4O35988 Gm24968-201ENSMUST00000179817 107 ntBASIC1.55□□□□□ -2.16
Sdc4O35988 Gm6651-201ENSMUST00000189471 271 ntBASIC1.55□□□□□ -2.16
Sdc4O35988 Gm44472-201ENSMUST00000204922 943 ntBASIC1.55□□□□□ -2.16
Sdc4O35988 AC073947.3-201ENSMUST00000215576 766 ntBASIC1.55□□□□□ -2.16
Sdc4O35988 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Sdc4O35988 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Sdc4O35988 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC1.55□□□□□ -2.16
Sdc4O35988 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.54□□□□□ -2.16
Sdc4O35988 Mir873a-201ENSMUST00000104863 77 ntBASIC1.54□□□□□ -2.16
Sdc4O35988 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC1.54□□□□□ -2.16
Sdc4O35988 Gm23558-201ENSMUST00000157823 80 ntBASIC1.54□□□□□ -2.16
Sdc4O35988 Gm24222-201ENSMUST00000158834 93 ntBASIC1.54□□□□□ -2.16
Sdc4O35988 Gm6395-201ENSMUST00000167639 691 ntBASIC1.54□□□□□ -2.16
Sdc4O35988 Gm21885-201ENSMUST00000178891 327 ntBASIC1.54□□□□□ -2.16
Sdc4O35988 Gm27599-201ENSMUST00000183758 174 ntBASIC1.54□□□□□ -2.16
Sdc4O35988 Mir6372-201ENSMUST00000185114 109 ntBASIC1.54□□□□□ -2.16
Sdc4O35988 Gm28794-201ENSMUST00000185276 136 ntBASIC1.54□□□□□ -2.16
Sdc4O35988 Gm7329-201ENSMUST00000185915 210 ntBASIC1.54□□□□□ -2.16
Sdc4O35988 Gm19123-201ENSMUST00000190716 651 ntBASIC1.54□□□□□ -2.16
Sdc4O35988 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC1.54□□□□□ -2.16
Sdc4O35988 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.54□□□□□ -2.16
Sdc4O35988 Gm43284-201ENSMUST00000200103 253 ntBASIC1.54□□□□□ -2.16
Sdc4O35988 Gm18645-201ENSMUST00000209593 651 ntBASIC1.54□□□□□ -2.16
Sdc4O35988 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC1.54□□□□□ -2.16
Sdc4O35988 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC1.54□□□□□ -2.16
Sdc4O35988 AC127302.1-201ENSMUST00000215973 1111 ntBASIC1.54□□□□□ -2.16
Sdc4O35988 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Sdc4O35988 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Sdc4O35988 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Sdc4O35988 Gm23932-201ENSMUST00000082914 107 ntBASIC1.54□□□□□ -2.16
Sdc4O35988 Gm23377-201ENSMUST00000082943 126 ntBASIC1.54□□□□□ -2.16
Sdc4O35988 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
Sdc4O35988 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Sdc4O35988 Gm13731-201ENSMUST00000117332 196 ntBASIC1.53□□□□□ -2.16
Sdc4O35988 Gm13806-201ENSMUST00000117822 325 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms