Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm11935-201ENSMUST00000118608 399 ntBASIC4.03□□□□□ -1.76
Trim55G3X8Y1 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.03□□□□□ -1.76
Trim55G3X8Y1 Gm11281-201ENSMUST00000141391 576 ntBASIC4.03□□□□□ -1.76
Trim55G3X8Y1 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trim55G3X8Y1 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trim55G3X8Y1 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC4.03□□□□□ -1.76
Trim55G3X8Y1 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim55G3X8Y1 Mir7074-201ENSMUST00000183884 63 ntBASIC4.03□□□□□ -1.76
Trim55G3X8Y1 Gm27445-201ENSMUST00000184484 72 ntBASIC4.03□□□□□ -1.76
Trim55G3X8Y1 Mir6899-201ENSMUST00000184798 64 ntBASIC4.03□□□□□ -1.76
Trim55G3X8Y1 Gm28650-201ENSMUST00000188413 411 ntBASIC4.03□□□□□ -1.76
Trim55G3X8Y1 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim55G3X8Y1 Gm37836-201ENSMUST00000195875 175 ntBASIC4.03□□□□□ -1.76
Trim55G3X8Y1 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.03□□□□□ -1.76
Trim55G3X8Y1 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.03□□□□□ -1.76
Trim55G3X8Y1 Gm23464-201ENSMUST00000083145 147 ntBASIC4.03□□□□□ -1.76
Trim55G3X8Y1 Gm23454-201ENSMUST00000083332 133 ntBASIC4.03□□□□□ -1.76
Trim55G3X8Y1 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim55G3X8Y1 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.03□□□□□ -1.76
Trim55G3X8Y1 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC4.03□□□□□ -1.77
Trim55G3X8Y1 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Gm13439-201ENSMUST00000117541 409 ntBASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Gm11936-201ENSMUST00000118323 160 ntBASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Gm22957-201ENSMUST00000122511 123 ntBASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Gm24481-201ENSMUST00000157210 102 ntBASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Gm22598-201ENSMUST00000157600 127 ntBASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Zakit-201ENSMUST00000157677 308 ntBASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Gm22114-201ENSMUST00000177756 107 ntBASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Gm28288-201ENSMUST00000191019 214 ntBASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 AC163033.1-201ENSMUST00000218608 157 ntBASIC4.02□□□□□ -1.77
Trim55G3X8Y1 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Gm23055-201ENSMUST00000082805 94 ntBASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.02□□□□□ -1.77
Trim55G3X8Y1 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim55G3X8Y1 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Gm23014-201ENSMUST00000104144 130 ntBASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Gm23226-201ENSMUST00000116927 103 ntBASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Gm15151-201ENSMUST00000117106 177 ntBASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Gm12884-201ENSMUST00000120371 325 ntBASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Gm23196-201ENSMUST00000158806 107 ntBASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Gm23053-201ENSMUST00000175136 96 ntBASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Gm26426-201ENSMUST00000177866 123 ntBASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Gm23141-201ENSMUST00000178682 94 ntBASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Gm26060-201ENSMUST00000180094 123 ntBASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Gm27568-201ENSMUST00000184220 99 ntBASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Mir6391-201ENSMUST00000184391 104 ntBASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Gm27611-201ENSMUST00000184690 108 ntBASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Gm19620-201ENSMUST00000195972 434 ntBASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Gm45313-201ENSMUST00000210584 178 ntBASIC4.01□□□□□ -1.77
Trim55G3X8Y1 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim55G3X8Y1 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trim55G3X8Y1 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4□□□□□ -1.77
Trim55G3X8Y1 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim55G3X8Y1 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC4□□□□□ -1.77
Trim55G3X8Y1 Gm12647-201ENSMUST00000118977 265 ntBASIC4□□□□□ -1.77
Trim55G3X8Y1 Gm13725-201ENSMUST00000122139 207 ntBASIC4□□□□□ -1.77
Trim55G3X8Y1 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC4□□□□□ -1.77
Trim55G3X8Y1 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trim55G3X8Y1 Gm16218-201ENSMUST00000155424 388 ntBASIC4□□□□□ -1.77
Trim55G3X8Y1 Gm22225-201ENSMUST00000157358 278 ntBASIC4□□□□□ -1.77
Trim55G3X8Y1 Gm22789-201ENSMUST00000157884 130 ntBASIC4□□□□□ -1.77
Trim55G3X8Y1 Gm24959-201ENSMUST00000157924 146 ntBASIC4□□□□□ -1.77
Trim55G3X8Y1 Gm17065-201ENSMUST00000165245 239 ntBASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms