Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm12235-201ENSMUST00000118596 170 ntBASIC1.84□□□□□ -2.11
Chd3B1AR17 Gm15760-201ENSMUST00000119553 283 ntBASIC1.84□□□□□ -2.11
Chd3B1AR17 Gm12926-201ENSMUST00000121158 409 ntBASIC1.84□□□□□ -2.11
Chd3B1AR17 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Chd3B1AR17 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC1.84□□□□□ -2.11
Chd3B1AR17 Gm22037-201ENSMUST00000157280 296 ntBASIC1.84□□□□□ -2.11
Chd3B1AR17 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Chd3B1AR17 Gm17161-201ENSMUST00000169187 524 ntBASIC1.84□□□□□ -2.11
Chd3B1AR17 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Chd3B1AR17 Mir3473c-201ENSMUST00000175262 81 ntBASIC1.84□□□□□ -2.11
Chd3B1AR17 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Chd3B1AR17 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Chd3B1AR17 Gm27656-201ENSMUST00000185055 80 ntBASIC1.84□□□□□ -2.11
Chd3B1AR17 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC1.84□□□□□ -2.11
Chd3B1AR17 AC154828.2-201ENSMUST00000220908 1070 ntBASIC1.84□□□□□ -2.11
Chd3B1AR17 Gm25080-201ENSMUST00000082526 107 ntBASIC1.84□□□□□ -2.11
Chd3B1AR17 Gm24928-201ENSMUST00000083399 107 ntBASIC1.84□□□□□ -2.11
Chd3B1AR17 Gm25897-201ENSMUST00000083709 107 ntBASIC1.84□□□□□ -2.11
Chd3B1AR17 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Chd3B1AR17 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Chd3B1AR17 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
Chd3B1AR17 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Chd3B1AR17 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Chd3B1AR17 Gm13085-201ENSMUST00000118356 171 ntBASIC1.84□□□□□ -2.12
Chd3B1AR17 Gm5287-201ENSMUST00000120666 598 ntBASIC1.84□□□□□ -2.12
Chd3B1AR17 Gm15381-201ENSMUST00000121501 1156 ntBASIC1.84□□□□□ -2.12
Chd3B1AR17 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC1.84□□□□□ -2.12
Chd3B1AR17 Gm25051-201ENSMUST00000158602 249 ntBASIC1.84□□□□□ -2.12
Chd3B1AR17 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Chd3B1AR17 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC1.84□□□□□ -2.12
Chd3B1AR17 Gm8532-201ENSMUST00000179174 461 ntBASIC1.84□□□□□ -2.12
Chd3B1AR17 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC1.84□□□□□ -2.12
Chd3B1AR17 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Chd3B1AR17 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Chd3B1AR17 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Chd3B1AR17 Gm25888-201ENSMUST00000157778 302 ntBASIC1.83□□□□□ -2.12
Chd3B1AR17 Gm26029-201ENSMUST00000158659 132 ntBASIC1.83□□□□□ -2.12
Chd3B1AR17 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Chd3B1AR17 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC1.83□□□□□ -2.12
Chd3B1AR17 Mir7678-201ENSMUST00000185076 71 ntBASIC1.83□□□□□ -2.12
Chd3B1AR17 Gm28163-201ENSMUST00000187099 325 ntBASIC1.83□□□□□ -2.12
Chd3B1AR17 Gm29184-201ENSMUST00000190038 334 ntBASIC1.83□□□□□ -2.12
Chd3B1AR17 AC172027.1-201ENSMUST00000217659 337 ntBASIC1.83□□□□□ -2.12
Chd3B1AR17 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.83□□□□□ -2.12
Chd3B1AR17 Gm24151-201ENSMUST00000082758 141 ntBASIC1.83□□□□□ -2.12
Chd3B1AR17 Gm23932-201ENSMUST00000082914 107 ntBASIC1.83□□□□□ -2.12
Chd3B1AR17 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Chd3B1AR17 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Chd3B1AR17 Gm13714-201ENSMUST00000117313 221 ntBASIC1.82□□□□□ -2.12
Chd3B1AR17 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.82□□□□□ -2.12
Chd3B1AR17 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC1.82□□□□□ -2.12
Chd3B1AR17 Gm22560-201ENSMUST00000157332 120 ntBASIC1.82□□□□□ -2.12
Chd3B1AR17 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Chd3B1AR17 Mir6995-201ENSMUST00000183658 71 ntBASIC1.82□□□□□ -2.12
Chd3B1AR17 Gm37692-201ENSMUST00000192633 232 ntBASIC1.82□□□□□ -2.12
Chd3B1AR17 Gm44295-201ENSMUST00000203805 437 ntBASIC1.82□□□□□ -2.12
Chd3B1AR17 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.82□□□□□ -2.12
Chd3B1AR17 AC154636.3-201ENSMUST00000221489 1214 ntBASIC1.82□□□□□ -2.12
Chd3B1AR17 CR974485.1-201ENSMUST00000222408 402 ntBASIC1.82□□□□□ -2.12
Chd3B1AR17 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Chd3B1AR17 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
Chd3B1AR17 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Chd3B1AR17 Gm13153-201ENSMUST00000120969 637 ntBASIC1.82□□□□□ -2.12
Chd3B1AR17 Gm16359-201ENSMUST00000124511 289 ntBASIC1.82□□□□□ -2.12
Chd3B1AR17 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Chd3B1AR17 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Chd3B1AR17 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Chd3B1AR17 Gm13876-201ENSMUST00000118451 261 ntBASIC1.81□□□□□ -2.12
Chd3B1AR17 Gm13359-201ENSMUST00000119000 695 ntBASIC1.81□□□□□ -2.12
Chd3B1AR17 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.81□□□□□ -2.12
Chd3B1AR17 Mir6240-201ENSMUST00000184281 117 ntBASIC1.81□□□□□ -2.12
Chd3B1AR17 Gm44300-201ENSMUST00000196792 121 ntBASIC1.81□□□□□ -2.12
Chd3B1AR17 Gm3724-201ENSMUST00000197957 349 ntBASIC1.81□□□□□ -2.12
Chd3B1AR17 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC1.81□□□□□ -2.12
Chd3B1AR17 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.81□□□□□ -2.12
Chd3B1AR17 Gm5583-201ENSMUST00000174328 1519 ntBASIC1.81□□□□□ -2.12
Chd3B1AR17 Gm2348-201ENSMUST00000108782 300 ntBASIC1.81□□□□□ -2.12
Chd3B1AR17 Gm23109-201ENSMUST00000116867 126 ntBASIC1.81□□□□□ -2.12
Chd3B1AR17 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.81□□□□□ -2.12
Chd3B1AR17 Gm14748-201ENSMUST00000119819 411 ntBASIC1.81□□□□□ -2.12
Chd3B1AR17 Gm25047-201ENSMUST00000122667 104 ntBASIC1.81□□□□□ -2.12
Chd3B1AR17 Gm24770-201ENSMUST00000158505 92 ntBASIC1.81□□□□□ -2.12
Chd3B1AR17 Gm44548-201ENSMUST00000208929 192 ntBASIC1.81□□□□□ -2.12
Chd3B1AR17 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.81□□□□□ -2.12
Chd3B1AR17 Gm25038-201ENSMUST00000082928 130 ntBASIC1.81□□□□□ -2.12
Chd3B1AR17 Gm44679-201ENSMUST00000207202 2908 ntBASIC1.81□□□□□ -2.12
Chd3B1AR17 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.8□□□□□ -2.12
Chd3B1AR17 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
Chd3B1AR17 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
Chd3B1AR17 Gm23431-201ENSMUST00000104006 107 ntBASIC1.8□□□□□ -2.12
Chd3B1AR17 Gm6829-201ENSMUST00000119858 360 ntBASIC1.8□□□□□ -2.12
Chd3B1AR17 Gm26105-201ENSMUST00000157253 190 ntBASIC1.8□□□□□ -2.12
Chd3B1AR17 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Chd3B1AR17 Gm22252-201ENSMUST00000179316 79 ntBASIC1.8□□□□□ -2.12
Chd3B1AR17 Mir7016-201ENSMUST00000184308 72 ntBASIC1.8□□□□□ -2.12
Chd3B1AR17 Gm18268-201ENSMUST00000208445 943 ntBASIC1.8□□□□□ -2.12
Chd3B1AR17 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.8□□□□□ -2.12
Chd3B1AR17 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Chd3B1AR17 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Chd3B1AR17 Gm22978-201ENSMUST00000082607 160 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms