Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Scn3aA2ASI5 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.05□□□□□ -2.08
Scn3aA2ASI5 Gm19147-201ENSMUST00000199622 652 ntBASIC2.05□□□□□ -2.08
Scn3aA2ASI5 AC168880.1-201ENSMUST00000225113 707 ntBASIC2.05□□□□□ -2.08
Scn3aA2ASI5 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Scn3aA2ASI5 Gm6369-201ENSMUST00000069626 412 ntBASIC2.05□□□□□ -2.08
Scn3aA2ASI5 Olfr815-201ENSMUST00000071557 951 ntBASIC2.05□□□□□ -2.08
Scn3aA2ASI5 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
Scn3aA2ASI5 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.04□□□□□ -2.08
Scn3aA2ASI5 Gm15162-201ENSMUST00000119325 283 ntBASIC2.04□□□□□ -2.08
Scn3aA2ASI5 Gm22561-201ENSMUST00000157331 84 ntBASIC2.04□□□□□ -2.08
Scn3aA2ASI5 Gm22316-201ENSMUST00000158012 216 ntBASIC2.04□□□□□ -2.08
Scn3aA2ASI5 Gm3221-201ENSMUST00000164869 440 ntBASIC2.04□□□□□ -2.08
Scn3aA2ASI5 Gm26864-201ENSMUST00000181346 156 ntBASIC2.04□□□□□ -2.08
Scn3aA2ASI5 Gm27869-201ENSMUST00000184327 122 ntBASIC2.04□□□□□ -2.08
Scn3aA2ASI5 Gm18448-201ENSMUST00000186286 599 ntBASIC2.04□□□□□ -2.08
Scn3aA2ASI5 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.04□□□□□ -2.08
Scn3aA2ASI5 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Scn3aA2ASI5 Gm44881-201ENSMUST00000205425 367 ntBASIC2.04□□□□□ -2.08
Scn3aA2ASI5 Gm45048-201ENSMUST00000207058 429 ntBASIC2.04□□□□□ -2.08
Scn3aA2ASI5 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.04□□□□□ -2.08
Scn3aA2ASI5 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.04□□□□□ -2.08
Scn3aA2ASI5 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Scn3aA2ASI5 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Scn3aA2ASI5 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.04□□□□□ -2.08
Scn3aA2ASI5 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Scn3aA2ASI5 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm25526-201ENSMUST00000104332 132 ntBASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm14931-201ENSMUST00000111079 253 ntBASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm14713-201ENSMUST00000122362 686 ntBASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm20534-201ENSMUST00000172957 172 ntBASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm24086-201ENSMUST00000175171 98 ntBASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm20698-201ENSMUST00000175657 233 ntBASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.03□□□□□ -2.08
Scn3aA2ASI5 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
Scn3aA2ASI5 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm5937-201ENSMUST00000119715 643 ntBASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm23032-201ENSMUST00000157995 107 ntBASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm24552-201ENSMUST00000158646 103 ntBASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm17538-201ENSMUST00000168236 327 ntBASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm17186-201ENSMUST00000171742 456 ntBASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.03□□□□□ -2.08
Scn3aA2ASI5 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.03□□□□□ -2.08
Scn3aA2ASI5 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.03□□□□□ -2.08
Scn3aA2ASI5 AC156574.2-201ENSMUST00000228023 282 ntBASIC2.03□□□□□ -2.08
Scn3aA2ASI5 Gm22578-201ENSMUST00000083730 107 ntBASIC2.03□□□□□ -2.08
Scn3aA2ASI5 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.02□□□□□ -2.09
Scn3aA2ASI5 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.02□□□□□ -2.09
Scn3aA2ASI5 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.02□□□□□ -2.09
Scn3aA2ASI5 Gm25365-201ENSMUST00000158852 121 ntBASIC2.02□□□□□ -2.09
Scn3aA2ASI5 Gm16588-201ENSMUST00000162889 355 ntBASIC2.02□□□□□ -2.09
Scn3aA2ASI5 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Scn3aA2ASI5 Gm20915-201ENSMUST00000191575 663 ntBASIC2.02□□□□□ -2.09
Scn3aA2ASI5 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC2.02□□□□□ -2.09
Scn3aA2ASI5 Igkv13-82-201ENSMUST00000200308 346 ntBASIC2.02□□□□□ -2.09
Scn3aA2ASI5 Gm18691-201ENSMUST00000203593 872 ntBASIC2.02□□□□□ -2.09
Scn3aA2ASI5 AC069561.3-201ENSMUST00000217321 114 ntBASIC2.02□□□□□ -2.09
Scn3aA2ASI5 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Scn3aA2ASI5 Gm25796-201ENSMUST00000082645 163 ntBASIC2.02□□□□□ -2.09
Scn3aA2ASI5 Gm23723-201ENSMUST00000082996 132 ntBASIC2.02□□□□□ -2.09
Scn3aA2ASI5 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Scn3aA2ASI5 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Scn3aA2ASI5 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Scn3aA2ASI5 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Scn3aA2ASI5 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Gm12814-201ENSMUST00000117091 846 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Gm14020-201ENSMUST00000118165 662 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Gm17162-201ENSMUST00000168538 473 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Gm26195-201ENSMUST00000175035 101 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Mir6541-201ENSMUST00000183649 110 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Gm7858-201ENSMUST00000190177 622 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Gm18341-201ENSMUST00000197538 622 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Gm46103-201ENSMUST00000217614 341 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 CT009733.1-203ENSMUST00000224033 451 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Gm11384-201ENSMUST00000121376 303 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Gm14411-201ENSMUST00000121798 914 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Gm22225-201ENSMUST00000157358 278 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Gm22390-201ENSMUST00000157588 325 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Gm6788-201ENSMUST00000166459 270 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Mir3569-201ENSMUST00000185080 58 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Gm38149-201ENSMUST00000191943 339 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Gm43224-201ENSMUST00000201567 898 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 AC141642.1-201ENSMUST00000220598 229 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Gm19540-201ENSMUST00000221843 810 ntBASIC2.01□□□□□ -2.09
Scn3aA2ASI5 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms