Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Gm22591-201ENSMUST00000104243 106 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm6954-201ENSMUST00000117416 225 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm14899-201ENSMUST00000118673 548 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm11407-201ENSMUST00000120362 1058 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm12045-201ENSMUST00000122122 573 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm6182-201ENSMUST00000156439 1208 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm22236-201ENSMUST00000157093 106 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm21726-201ENSMUST00000179654 392 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm27532-201ENSMUST00000183726 113 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm8392-201ENSMUST00000185647 835 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm29184-201ENSMUST00000190038 334 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm19193-201ENSMUST00000190263 590 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm37568-201ENSMUST00000191755 364 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm36966-201ENSMUST00000192217 413 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm44391-201ENSMUST00000198490 93 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm44295-201ENSMUST00000203805 437 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm44990-201ENSMUST00000203922 217 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.18□□□□□ -2.06
CtcflA2APF3 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm19118-201ENSMUST00000222554 98 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 AC170810.3-201ENSMUST00000226177 374 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 AC166344.2-201ENSMUST00000226747 374 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm26055-201ENSMUST00000083038 107 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm25755-201ENSMUST00000083396 107 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.18□□□□□ -2.06
CtcflA2APF3 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.18□□□□□ -2.06
CtcflA2APF3 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CtcflA2APF3 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CtcflA2APF3 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm43924-201ENSMUST00000204851 1736 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm14835-201ENSMUST00000119039 315 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm11598-201ENSMUST00000119257 357 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm14428-201ENSMUST00000120408 822 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm14411-201ENSMUST00000121798 914 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm8880-201ENSMUST00000121800 454 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm14694-201ENSMUST00000121856 282 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm14821-201ENSMUST00000121975 435 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm13406-201ENSMUST00000121991 256 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm25153-201ENSMUST00000157118 156 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm22083-201ENSMUST00000157586 102 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm24691-201ENSMUST00000157762 140 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm17162-201ENSMUST00000168538 473 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm26195-201ENSMUST00000175035 101 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm18416-201ENSMUST00000175635 1003 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm27817-201ENSMUST00000184302 233 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm18692-201ENSMUST00000193047 511 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm17771-201ENSMUST00000194477 1147 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm3442-201ENSMUST00000216808 710 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 AC167192.4-201ENSMUST00000224087 993 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm24313-201ENSMUST00000082561 133 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm25628-201ENSMUST00000084002 105 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.17□□□□□ -2.06
CtcflA2APF3 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CtcflA2APF3 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CtcflA2APF3 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm22494-201ENSMUST00000104495 128 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm12814-201ENSMUST00000117091 846 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm11352-201ENSMUST00000119264 517 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm14945-201ENSMUST00000119556 1118 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm13356-201ENSMUST00000121678 335 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm23885-201ENSMUST00000122682 294 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm22755-201ENSMUST00000157143 100 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm26101-201ENSMUST00000157246 105 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm25391-201ENSMUST00000157342 134 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm25637-201ENSMUST00000157529 107 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm24769-201ENSMUST00000158506 129 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CtcflA2APF3 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CtcflA2APF3 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm22584-201ENSMUST00000177935 92 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 Mir7013-201ENSMUST00000183540 72 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm29550-201ENSMUST00000185543 285 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm29641-201ENSMUST00000188955 259 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm37119-201ENSMUST00000195691 389 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm42665-201ENSMUST00000202100 586 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 Gm45452-201ENSMUST00000210905 177 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 AC111046.1-201ENSMUST00000217715 412 ntBASIC2.16□□□□□ -2.06
CtcflA2APF3 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.16□□□□□ -2.06
CtcflA2APF3 AC156560.1-201ENSMUST00000221425 256 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms