Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
H2afb1S4R1E0 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm6274-201ENSMUST00000118173 797 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm8217-201ENSMUST00000119136 465 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm5937-201ENSMUST00000119715 643 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm11384-201ENSMUST00000121376 303 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm24730-201ENSMUST00000158228 117 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm23068-201ENSMUST00000158239 293 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm3104-201ENSMUST00000171004 473 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm26335-201ENSMUST00000178449 107 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm6801-201ENSMUST00000190697 339 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm38109-201ENSMUST00000195386 181 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm43367-201ENSMUST00000199986 625 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm15235-201ENSMUST00000200572 194 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 AC153141.1-201ENSMUST00000218636 501 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm5374-201ENSMUST00000222868 657 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm23297-201ENSMUST00000083184 127 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 n-R5s85-201ENSMUST00000083453 113 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 AC104897.1-201ENSMUST00000222638 3628 ntBASIC2.67□□□□□ -1.98
H2afb1S4R1E0 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Gm24119-201ENSMUST00000103979 246 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Gm11386-201ENSMUST00000117761 347 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Gm12458-201ENSMUST00000119387 495 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Gm15760-201ENSMUST00000119553 283 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Gm14638-201ENSMUST00000121338 216 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Gm9892-201ENSMUST00000182415 992 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Gm28591-201ENSMUST00000185259 183 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Gm37085-201ENSMUST00000193780 196 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Gm44324-201ENSMUST00000198517 135 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Gm25203-202ENSMUST00000200458 216 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Gm44961-201ENSMUST00000207450 196 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 AC140785.1-201ENSMUST00000217782 383 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
H2afb1S4R1E0 AC154245.1-201ENSMUST00000224615 601 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Gm25592-201ENSMUST00000082635 131 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Gm25203-201ENSMUST00000082842 215 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Gm26263-201ENSMUST00000083281 164 ntBASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
H2afb1S4R1E0 Gm37999-201ENSMUST00000195178 1809 ntBASIC2.65□□□□□ -1.98
H2afb1S4R1E0 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm26147-201ENSMUST00000104479 114 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm13475-201ENSMUST00000119290 234 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 AA413626-201ENSMUST00000121125 494 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm12238-201ENSMUST00000127764 124 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm8289-201ENSMUST00000144814 1182 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm22098-201ENSMUST00000157930 85 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm22416-201ENSMUST00000158590 88 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm25119-201ENSMUST00000158815 88 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm20651-201ENSMUST00000177219 329 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm21638-201ENSMUST00000179473 836 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm26585-201ENSMUST00000180890 630 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Mir7093-201ENSMUST00000184195 101 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm27700-201ENSMUST00000185003 81 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm44465-201ENSMUST00000199536 114 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm32381-201ENSMUST00000203192 476 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm44399-201ENSMUST00000205043 226 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm7495-201ENSMUST00000215099 426 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 AC147101.1-201ENSMUST00000217964 312 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 AC164117.2-201ENSMUST00000222090 327 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC2.65□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms