Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm22378-201ENSMUST00000157481 111 ntBASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Gm22337-201ENSMUST00000157721 132 ntBASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Gm23640-201ENSMUST00000157860 104 ntBASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Gm5967-201ENSMUST00000172723 494 ntBASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Gm22859-201ENSMUST00000174978 122 ntBASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Gm27952-201ENSMUST00000184748 105 ntBASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Mir7028-201ENSMUST00000185016 64 ntBASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Igkv13-76-201ENSMUST00000197621 347 ntBASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Gm44757-201ENSMUST00000206373 157 ntBASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Gm25651-201ENSMUST00000083782 119 ntBASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Gm8935-202ENSMUST00000105727 1959 ntBASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Prpf40aQ9R1C7 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gm22778-201ENSMUST00000104090 128 ntBASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gm22473-201ENSMUST00000104114 132 ntBASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gm23014-201ENSMUST00000104144 130 ntBASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Mir105-201ENSMUST00000104655 80 ntBASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gm11065-201ENSMUST00000111462 228 ntBASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gm13386-201ENSMUST00000117677 124 ntBASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gm12797-201ENSMUST00000118645 273 ntBASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gm23002-201ENSMUST00000179221 107 ntBASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gm27476-201ENSMUST00000183366 104 ntBASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gm27465-201ENSMUST00000184290 91 ntBASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gm7329-201ENSMUST00000185915 210 ntBASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gm44376-201ENSMUST00000197570 128 ntBASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gm22294-201ENSMUST00000083308 104 ntBASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gm22350-201ENSMUST00000083924 156 ntBASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Prpf40aQ9R1C7 AC124561.2-201ENSMUST00000226657 1973 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Gm22272-201ENSMUST00000104039 134 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Gm10552-201ENSMUST00000113396 372 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Gm12982-201ENSMUST00000117408 190 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Gm12328-201ENSMUST00000118611 197 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Gm14303-201ENSMUST00000121320 171 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Gm23906-201ENSMUST00000157573 128 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Gm26001-201ENSMUST00000157989 103 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Gm27690-201ENSMUST00000184596 126 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Gm28830-201ENSMUST00000188192 213 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Gm6051-201ENSMUST00000201529 352 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Gm44389-201ENSMUST00000203795 182 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Gm45499-201ENSMUST00000211656 280 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 AC171206.2-201ENSMUST00000215252 389 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Gm7065-201ENSMUST00000222150 474 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 AC154262.1-201ENSMUST00000225976 286 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 AC160550.3-201ENSMUST00000226818 400 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 AC123533.1-201ENSMUST00000227782 446 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Prpf40aQ9R1C7 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.84□□□□□ -1.63
Prpf40aQ9R1C7 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
Prpf40aQ9R1C7 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.84□□□□□ -1.63
Prpf40aQ9R1C7 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Prpf40aQ9R1C7 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
Prpf40aQ9R1C7 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.84□□□□□ -1.63
Prpf40aQ9R1C7 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Prpf40aQ9R1C7 Gm15426-201ENSMUST00000117823 556 ntBASIC4.84□□□□□ -1.63
Prpf40aQ9R1C7 Gm12571-201ENSMUST00000118132 243 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms