Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Nubp1Q9R060 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Nubp1Q9R060 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Nubp1Q9R060 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.58□□□□□ -1.68
Nubp1Q9R060 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Nubp1Q9R060 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Nubp1Q9R060 AC192616.2-201ENSMUST00000221482 3841 ntBASIC4.58□□□□□ -1.68
Nubp1Q9R060 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Nubp1Q9R060 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Nubp1Q9R060 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
Nubp1Q9R060 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Nubp1Q9R060 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
Nubp1Q9R060 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
Nubp1Q9R060 Snord66-201ENSMUST00000104051 75 ntBASIC4.57□□□□□ -1.68
Nubp1Q9R060 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC4.57□□□□□ -1.68
Nubp1Q9R060 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.57□□□□□ -1.68
Nubp1Q9R060 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.57□□□□□ -1.68
Nubp1Q9R060 Gm23906-201ENSMUST00000157573 128 ntBASIC4.57□□□□□ -1.68
Nubp1Q9R060 Mir6410-201ENSMUST00000184204 104 ntBASIC4.57□□□□□ -1.68
Nubp1Q9R060 Mir21b-201ENSMUST00000184317 108 ntBASIC4.57□□□□□ -1.68
Nubp1Q9R060 Mir6391-201ENSMUST00000184391 104 ntBASIC4.57□□□□□ -1.68
Nubp1Q9R060 Gm29005-201ENSMUST00000186773 320 ntBASIC4.57□□□□□ -1.68
Nubp1Q9R060 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC4.57□□□□□ -1.68
Nubp1Q9R060 Gm28314-201ENSMUST00000191276 345 ntBASIC4.57□□□□□ -1.68
Nubp1Q9R060 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Nubp1Q9R060 Igkv1-115-201ENSMUST00000198714 302 ntBASIC4.57□□□□□ -1.68
Nubp1Q9R060 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.57□□□□□ -1.68
Nubp1Q9R060 Mir346-201ENSMUST00000083547 98 ntBASIC4.57□□□□□ -1.68
Nubp1Q9R060 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Nubp1Q9R060 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Nubp1Q9R060 Gm37645-201ENSMUST00000194285 3556 ntBASIC4.57□□□□□ -1.68
Nubp1Q9R060 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Nubp1Q9R060 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Nubp1Q9R060 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Nubp1Q9R060 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Nubp1Q9R060 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Nubp1Q9R060 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nubp1Q9R060 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nubp1Q9R060 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Nubp1Q9R060 Gm22266-201ENSMUST00000104011 138 ntBASIC4.56□□□□□ -1.68
Nubp1Q9R060 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nubp1Q9R060 Mir1298-201ENSMUST00000116681 98 ntBASIC4.56□□□□□ -1.68
Nubp1Q9R060 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.56□□□□□ -1.68
Nubp1Q9R060 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.56□□□□□ -1.68
Nubp1Q9R060 Gm24477-201ENSMUST00000157438 103 ntBASIC4.56□□□□□ -1.68
Nubp1Q9R060 Gm25865-201ENSMUST00000158247 104 ntBASIC4.56□□□□□ -1.68
Nubp1Q9R060 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC4.56□□□□□ -1.68
Nubp1Q9R060 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.56□□□□□ -1.68
Nubp1Q9R060 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Nubp1Q9R060 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.56□□□□□ -1.68
Nubp1Q9R060 Gm24355-201ENSMUST00000082858 122 ntBASIC4.56□□□□□ -1.68
Nubp1Q9R060 Gm25789-201ENSMUST00000083294 76 ntBASIC4.56□□□□□ -1.68
Nubp1Q9R060 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nubp1Q9R060 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Nubp1Q9R060 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.56□□□□□ -1.68
Nubp1Q9R060 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Nubp1Q9R060 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Nubp1Q9R060 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nubp1Q9R060 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nubp1Q9R060 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nubp1Q9R060 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Nubp1Q9R060 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC4.56□□□□□ -1.68
Nubp1Q9R060 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.55□□□□□ -1.68
Nubp1Q9R060 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.55□□□□□ -1.68
Nubp1Q9R060 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Gm23320-201ENSMUST00000104462 127 ntBASIC4.55□□□□□ -1.68
Nubp1Q9R060 Gm12449-201ENSMUST00000117572 234 ntBASIC4.55□□□□□ -1.68
Nubp1Q9R060 Gm11460-201ENSMUST00000118200 361 ntBASIC4.55□□□□□ -1.68
Nubp1Q9R060 Gm15400-201ENSMUST00000118944 601 ntBASIC4.55□□□□□ -1.68
Nubp1Q9R060 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.55□□□□□ -1.68
Nubp1Q9R060 Gm25176-201ENSMUST00000122640 125 ntBASIC4.55□□□□□ -1.68
Nubp1Q9R060 Scarna10-201ENSMUST00000158992 325 ntBASIC4.55□□□□□ -1.68
Nubp1Q9R060 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Gm17522-201ENSMUST00000178144 498 ntBASIC4.55□□□□□ -1.68
Nubp1Q9R060 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Trbv18-201ENSMUST00000194256 294 ntBASIC4.55□□□□□ -1.68
Nubp1Q9R060 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Gm42988-201ENSMUST00000198116 225 ntBASIC4.55□□□□□ -1.68
Nubp1Q9R060 Gm44757-201ENSMUST00000206373 157 ntBASIC4.55□□□□□ -1.68
Nubp1Q9R060 Gm18462-201ENSMUST00000208112 417 ntBASIC4.55□□□□□ -1.68
Nubp1Q9R060 AC127371.1-202ENSMUST00000228923 306 ntBASIC4.55□□□□□ -1.68
Nubp1Q9R060 AC165415.1-201ENSMUST00000228924 273 ntBASIC4.55□□□□□ -1.68
Nubp1Q9R060 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Gm22421-201ENSMUST00000083058 107 ntBASIC4.55□□□□□ -1.68
Nubp1Q9R060 Gm25987-201ENSMUST00000083234 107 ntBASIC4.55□□□□□ -1.68
Nubp1Q9R060 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 102.1 ms