Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm18346-201ENSMUST00000216782 325 ntBASIC2.2□□□□□ -2.06
Trem1Q9JKE2 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.2□□□□□ -2.06
Trem1Q9JKE2 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.2□□□□□ -2.06
Trem1Q9JKE2 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trem1Q9JKE2 Mir19a-201ENSMUST00000083482 82 ntBASIC2.2□□□□□ -2.06
Trem1Q9JKE2 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trem1Q9JKE2 Gm14445-201ENSMUST00000117051 1484 ntBASIC2.2□□□□□ -2.06
Trem1Q9JKE2 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Gm11221-201ENSMUST00000117230 597 ntBASIC2.19□□□□□ -2.06
Trem1Q9JKE2 DQ267100-201ENSMUST00000122600 72 ntBASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Gm26280-201ENSMUST00000157096 101 ntBASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Gm23469-201ENSMUST00000157131 104 ntBASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Gm26411-201ENSMUST00000157668 107 ntBASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Gm22535-201ENSMUST00000158174 119 ntBASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Gm17154-201ENSMUST00000165748 431 ntBASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Gm21816-201ENSMUST00000179255 360 ntBASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Mir6382-201ENSMUST00000184055 110 ntBASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Gm43804-201ENSMUST00000198280 456 ntBASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Gm44519-201ENSMUST00000206486 122 ntBASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Gm44615-201ENSMUST00000206548 358 ntBASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Trem1Q9JKE2 AC156795.1-201ENSMUST00000214655 414 ntBASIC2.19□□□□□ -2.06
Trem1Q9JKE2 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.19□□□□□ -2.06
Trem1Q9JKE2 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Gm25007-201ENSMUST00000083808 133 ntBASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Gm23848-201ENSMUST00000083826 106 ntBASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Trem1Q9JKE2 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Trem1Q9JKE2 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Gm22590-201ENSMUST00000104247 128 ntBASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Gm11065-201ENSMUST00000111462 228 ntBASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Gm15312-201ENSMUST00000118827 271 ntBASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Gm14352-201ENSMUST00000119250 449 ntBASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Gm25624-201ENSMUST00000157222 275 ntBASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Gm27245-201ENSMUST00000184385 376 ntBASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Gm28358-202ENSMUST00000189292 223 ntBASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Gm18964-201ENSMUST00000193013 563 ntBASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Gm37029-201ENSMUST00000195773 239 ntBASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Mir7215-201ENSMUST00000200383 51 ntBASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Gm44794-201ENSMUST00000206550 411 ntBASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC2.18□□□□□ -2.06
Trem1Q9JKE2 AC125464.1-201ENSMUST00000228013 512 ntBASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Gm22353-201ENSMUST00000083918 136 ntBASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trem1Q9JKE2 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Mir706-201ENSMUST00000102262 84 ntBASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Gm12106-201ENSMUST00000116006 1200 ntBASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Gm12765-201ENSMUST00000117273 615 ntBASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Gm12656-201ENSMUST00000118149 577 ntBASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Gm12721-201ENSMUST00000120621 268 ntBASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Gm13903-201ENSMUST00000120945 193 ntBASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Gm16355-201ENSMUST00000128606 231 ntBASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Gm23078-201ENSMUST00000157848 148 ntBASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Gm24879-201ENSMUST00000158386 143 ntBASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Snord11-201ENSMUST00000158468 84 ntBASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Gm2855-201ENSMUST00000166765 456 ntBASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Mir7242-201ENSMUST00000183710 79 ntBASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Gm38154-201ENSMUST00000195444 340 ntBASIC2.17□□□□□ -2.06
Trem1Q9JKE2 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.17□□□□□ -2.06
Trem1Q9JKE2 AL590503.1-201ENSMUST00000222053 321 ntBASIC2.17□□□□□ -2.06
Trem1Q9JKE2 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Gm22443-201ENSMUST00000082890 107 ntBASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Trem1Q9JKE2 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trem1Q9JKE2 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trem1Q9JKE2 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Trem1Q9JKE2 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.16□□□□□ -2.06
Trem1Q9JKE2 Gm22939-201ENSMUST00000103958 131 ntBASIC2.16□□□□□ -2.06
Trem1Q9JKE2 Gm15183-201ENSMUST00000118933 348 ntBASIC2.16□□□□□ -2.06
Trem1Q9JKE2 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.16□□□□□ -2.06
Trem1Q9JKE2 Gm26414-201ENSMUST00000157674 269 ntBASIC2.16□□□□□ -2.06
Trem1Q9JKE2 Gm25365-201ENSMUST00000158852 121 ntBASIC2.16□□□□□ -2.06
Trem1Q9JKE2 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.16□□□□□ -2.06
Trem1Q9JKE2 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trem1Q9JKE2 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.16□□□□□ -2.06
Trem1Q9JKE2 Gm8031-201ENSMUST00000213430 626 ntBASIC2.16□□□□□ -2.06
Trem1Q9JKE2 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.16□□□□□ -2.06
Trem1Q9JKE2 AC164629.1-201ENSMUST00000220250 1113 ntBASIC2.16□□□□□ -2.06
Trem1Q9JKE2 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2.16□□□□□ -2.06
Trem1Q9JKE2 AC113031.5-201ENSMUST00000227116 606 ntBASIC2.16□□□□□ -2.06
Trem1Q9JKE2 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.16□□□□□ -2.06
Trem1Q9JKE2 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms