Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Mir6993-201ENSMUST00000184912 65 ntBASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Gm44459-201ENSMUST00000203926 160 ntBASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Gm34701-202ENSMUST00000204685 360 ntBASIC1.44□□□□□ -2.18
Trem3Q9JKE1 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trem3Q9JKE1 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC1.44□□□□□ -2.18
Trem3Q9JKE1 CT571256.1-201ENSMUST00000226045 585 ntBASIC1.44□□□□□ -2.18
Trem3Q9JKE1 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Gm25813-201ENSMUST00000082748 191 ntBASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trem3Q9JKE1 Gm45262-201ENSMUST00000209917 1463 ntBASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Gm15215-201ENSMUST00000117773 489 ntBASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Gm12926-201ENSMUST00000121158 409 ntBASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Gm17119-201ENSMUST00000163943 280 ntBASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Gm2930-201ENSMUST00000170403 474 ntBASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Gm26195-201ENSMUST00000175035 101 ntBASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Mir6376-201ENSMUST00000185149 131 ntBASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Gm37692-201ENSMUST00000192633 232 ntBASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Gm42672-201ENSMUST00000197821 352 ntBASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Gm43171-201ENSMUST00000199882 291 ntBASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Gm19457-201ENSMUST00000200995 448 ntBASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.43□□□□□ -2.18
Trem3Q9JKE1 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC1.43□□□□□ -2.18
Trem3Q9JKE1 AC069561.3-201ENSMUST00000217321 114 ntBASIC1.43□□□□□ -2.18
Trem3Q9JKE1 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC1.43□□□□□ -2.18
Trem3Q9JKE1 AC134860.6-201ENSMUST00000226038 285 ntBASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Mir193a-201ENSMUST00000083461 66 ntBASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Trem3Q9JKE1 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Gm13343-201ENSMUST00000116474 105 ntBASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Gm13602-201ENSMUST00000122405 493 ntBASIC1.42□□□□□ -2.18
Trem3Q9JKE1 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Gm23885-201ENSMUST00000122682 294 ntBASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Gm22603-201ENSMUST00000157603 96 ntBASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Gm24773-201ENSMUST00000158513 99 ntBASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Gm20656-201ENSMUST00000176925 518 ntBASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Gm21885-201ENSMUST00000178891 327 ntBASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Gm27511-201ENSMUST00000183502 127 ntBASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Mir8106-201ENSMUST00000184520 139 ntBASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Mir7021-201ENSMUST00000197026 63 ntBASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Gm45386-201ENSMUST00000210194 218 ntBASIC1.42□□□□□ -2.18
Trem3Q9JKE1 CT010455.1-201ENSMUST00000218579 413 ntBASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Trem3Q9JKE1 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Gm22740-201ENSMUST00000083439 109 ntBASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.42□□□□□ -2.18
Trem3Q9JKE1 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Gm12793-201ENSMUST00000119268 292 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Gm14945-201ENSMUST00000119556 1118 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Gm15193-201ENSMUST00000120224 865 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Gm13502-201ENSMUST00000121574 684 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Gm24716-201ENSMUST00000157524 104 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Gm22535-201ENSMUST00000158174 119 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Gm22386-201ENSMUST00000158192 129 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Gm22891-201ENSMUST00000158641 164 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Gm22257-201ENSMUST00000158687 301 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Mir7678-201ENSMUST00000185076 71 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Igkv2-105-201ENSMUST00000196931 377 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Gm8041-201ENSMUST00000199755 616 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Gm7039-201ENSMUST00000205138 346 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Gm44881-201ENSMUST00000205425 367 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Gm45530-201ENSMUST00000211658 225 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Trem3Q9JKE1 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC1.41□□□□□ -2.18
Trem3Q9JKE1 CT030184.1-201ENSMUST00000222393 416 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Mir300-201ENSMUST00000083485 79 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Gm45461-201ENSMUST00000211726 4535 ntBASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
Trem3Q9JKE1 Gm18300-201ENSMUST00000192792 1406 ntBASIC1.4□□□□□ -2.18
Trem3Q9JKE1 Mir1195-201ENSMUST00000116818 98 ntBASIC1.4□□□□□ -2.19
Trem3Q9JKE1 Gm14868-201ENSMUST00000117840 216 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms